Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0657 ATGGGAGTTTGTTTGAGCACCAAACCTAAAACTGGGTTAAACTCAAAGCATGTGAGTGCCGAGGCCAAAGATCTCAGCAGTCCAAGTAGTAAAATTACGAAAGATCTCAGTAGCACAATTAGTAAGGTCTCTGAGGTTTCGGTGCCTCATACCCTTCAGAGTGGAGGTGAGATCTTGTATTCATCCAATCTGAAGAGCTTTAGTTTGACAGAACTTACAGCTGCCACAAGAAATTTCCGTAAGGACAGTGTGTTAGGAGAGAATGGTTTTGGATCAGTTTTTAAGGGCTGGATTGACGATCACTCACTTTCTGCAACCAAACCTGGCACGGGGGTTGTTGTTGCTGTGAAAAGACTTAGCCAGGATAGCTTCCAAGGTCACGGGGAGTGGTTGGCAAGGCATGGTATGACTCATGAAGCAGGTCTCGAGGATGAAGTAAACTATCTAGGACAGCTTTCTCATCCTCATCTAGTGAAATTAATTGGATATTGCTTTGAAGATAGAGACCGTCTTCTGGTCTATGAATTTATGCCTCGTGGTAGCTTGGAGAATCACTTGTTCATGAGAGGCTCATATTTCCAACCTCTTTCTTGGGGCCTGCGTTTGAAAGTCGCTCTTGGTGCTGCCAAAGGGCTTGCATTTCTTCACAGTGCTGAAACAAAAGTGATATATCGAGATTTCAAGACCTCAAATGTCTTGCTGGATTCAAATTATAATGCAAAGCTTGCTGATTTGGGGCTCTTAAAGGACGCACCTACACGTGACAAAAGTCATGTCTCCACCAGAGTAATGGGAACCTACGGATATGCAGCTCCAGAATATCTAGCCACAGGTCATGTGAGTGGTAAGAGTGATGTCTTCAGTTTTGGAGTTGTGCTGCTAGAACTGTTATCTGGCAGGAGGGCTGTGGACAAGAACAGACCATCAGGACAGCACAATTTGGTGGAATGGGCAAAGCCATACATGGCAAACAAGAGAAAGCTTTTGAGTGTGTTAGATAACCGTCTTGAAGGCCAATATGATATAGATGAGGCTTTTAAGGTAGCTACCCTCTCTATGCGATGCCTTGCAACAGAATCTAAGTTGAGACCAAACATGCAAGAAGTTGTCACAGATTTGGAGCAGCTGCAGGTTCCCCATGTACATCATATTCGTTCTGTGAATACTTCTCGTAGTCGTAGAAAAAGTGCTGATGATTTAATCCATGGTAGAAGCGTTACAACTTCAGTTTCCCCTCTCTCACATGACATTGCAAATACACGTCCTTGA 1269 0.4397 MGVCLSTKPKTGLNSKHVSAEAKDLSSPSSKITKDLSSTISKVSEVSVPHTLQSGGEILYSSNLKSFSLTELTAATRNFRKDSVLGENGFGSVFKGWIDDHSLSATKPGTGVVVAVKRLSQDSFQGHGEWLARHGMTHEAGLEDEVNYLGQLSHPHLVKLIGYCFEDRDRLLVYEFMPRGSLENHLFMRGSYFQPLSWGLRLKVALGAAKGLAFLHSAETKVIYRDFKTSNVLLDSNYNAKLADLGLLKDAPTRDKSHVSTRVMGTYGYAAPEYLATGHVSGKSDVFSFGVVLLELLSGRRAVDKNRPSGQHNLVEWAKPYMANKRKLLSVLDNRLEGQYDIDEAFKVATLSMRCLATESKLRPNMQEVVTDLEQLQVPHVHHIRSVNTSRSRRKSADDLIHGRSVTTSVSPLSHDIANTRP* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0657 422 Pfam Protein tyrosine and serine/threonine kinase 82 373 IPR001245 GO:0004672|GO:0006468
Pvu11g0657 422 Gene3D Transferase(Phosphotransferase) domain 1 177 398 - -
Pvu11g0657 422 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 32 393 - -
Pvu11g0657 422 Gene3D Phosphorylase Kinase; domain 1 56 176 - -
Pvu11g0657 422 PANTHER OS01G0588500 PROTEIN-RELATED 32 393 - -
Pvu11g0657 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Pvu11g0657 422 ProSiteProfiles Protein kinase domain profile. 79 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0657 422 SUPERFAMILY Protein kinase-like (PK-like) 63 383 IPR011009 -
Pvu11g0657 422 MobiDBLite consensus disorder prediction 384 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0657 Pvu-Chr11 5553152 5556618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0657 57 373 Glycoside Hydrolase AT3G07070 45.912 3.58e-92 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu11g0657 PK_Tyr_Ser-Thr 1.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0657 - - gmx:100809679 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1489 5 37281721 37284611 Pvu11g0657 11 5553152 5556618 PCT