Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0656 ATGAAGTGCTTCTACTTCTCCAACGTTGACGACGACGATTGCGTGGCAGCGGCACCGAGTTCGCGCTGTTCCACTTCGCGCGTGTCGTGGGCGCGTTCGCTCAGTCTCATGGACACGCGCAGCCGCTCCAACTTCGACTCCGACTCCACGGAATTCTCCGACACGGTGGACTTCCATCACTTCCTGGTCCAGCGCCGTGCCAACGACCTGCGCCTCTTCCCCTTCTCAGCGCTGAAGTGCGCCACGCGCGGGTTCAGCCGCGCCCTCCTCGTAGGCGAGGGGGGGTTCGGGTCCGTGTACCGCGGCGTGGTGGAGGAAAAGGAGGTGGCGATCAAGCAGCTGAACCGCAACGGGCAGCAGGGCCACAAGGAGTGGATCAACGAGGTGAATTTGTTGGGAGTGGTGAAGCATCCTAATCTGGTGCGGTTGGTAGGGTACTGTGCTGAGGACGATGAAAGAGGGATTCAGAGGCTTCTGGTTTACGAGTTTATGCCGAATAAGAGCCTGGAGGAGCATCTCTTGGCGCGAGTCCCTTCCACGGTGCTGCCTTGGGGGACCAGGTTGAGAATTGCGCAAGATGCGGCTCGGGGTTTGGCTTATCTTCATGAAGAAATGGATTTTCAGCTAATATTTCGGGATTTTAAGGCGTCCAACATCCTGCTGGATGAGAACTTCAATGCAAAGCTTTCTGATTTTGGACTGGCTAGGCAAGGACCTTCAGAAGGGTCTGGCTATGTTTCAACAGCTGTTGTTGGTACCATAGGTTATGCTGCACCAGAGTATGTTCAGACTGGTAAGCTAACTGCTAAGAGTGATGTGTGGAGCTTTGGTGTAGTTCTTTACGAGCTTATCACTGGGAGGAGAGCTGTAGAGAGAAACCTACCTAAAACTGAACAAAAGCTTTTAGAGTGGGTTAGACCTTATGTTTCTGATCCTAGGAAGTTCCATCATATTGTAGACCCTCGACTTAAGGGACAATACTGCATCAAATCAGCTCATAAAATTGCAATCCTAGCAAACAAGTGCCTCATGAAACAGCCAAAGTCTCGCCCAAAAATGAGTGAGGTGGTTGACTCTCTTGGAAGCATTATTATTGAGACAGATACTCGGGATGAATGCTTCCCTCAAGCTGCTGTAGCCGCCCGAGAAGAAAAAGAAGAGAAGATATCTGTAGAGGAAACTGAACCTGAACCAGCTAAACAAGGGAACAATTACCTGAAGAAGGTTTTTGAATTCAAAGACATGGTCAGCTTAAGAAACAAGTCTATTGGAAGGTTGGATTGGAAAAGTTGGGCGCCTGGACTAGTAAGAAGTTGGTGA 1320 0.5061 MKCFYFSNVDDDDCVAAAPSSRCSTSRVSWARSLSLMDTRSRSNFDSDSTEFSDTVDFHHFLVQRRANDLRLFPFSALKCATRGFSRALLVGEGGFGSVYRGVVEEKEVAIKQLNRNGQQGHKEWINEVNLLGVVKHPNLVRLVGYCAEDDERGIQRLLVYEFMPNKSLEEHLLARVPSTVLPWGTRLRIAQDAARGLAYLHEEMDFQLIFRDFKASNILLDENFNAKLSDFGLARQGPSEGSGYVSTAVVGTIGYAAPEYVQTGKLTAKSDVWSFGVVLYELITGRRAVERNLPKTEQKLLEWVRPYVSDPRKFHHIVDPRLKGQYCIKSAHKIAILANKCLMKQPKSRPKMSEVVDSLGSIIIETDTRDECFPQAAVAAREEKEEKISVEETEPEPAKQGNNYLKKVFEFKDMVSLRNKSIGRLDWKSWAPGLVRSW* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0656 439 SUPERFAMILY Protein kinase-like (PK-like) 68 360 IPR011009 -
Pvu11g0656 439 PANTHER OS01G0588500 PROTEIN-RELATED 31 393 - -
Pvu11g0656 439 ProSitePatterns Protein kinases ATP-binding region signature. 91 112 IPR017441 GO:0005524
Pvu11g0656 439 ProSiteProfiles Protein kinase domain profile. 85 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0656 439 Gene3D Phosphorylase Kinase; domain 1 64 163 - -
Pvu11g0656 439 Gene3D Transferase(Phosphotransferase) domain 1 164 382 - -
Pvu11g0656 439 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 31 393 - -
Pvu11g0656 439 CDD STKc_IRAK 91 363 - -
Pvu11g0656 439 Pfam Protein kinase domain 90 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0656 Pvu-Chr11 5545970 5548766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0656 71 361 Glycoside Hydrolase AT3G07070 51.361 2.39e-97 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu11g0656 Pkinase 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0656 - - gmx:100811825 749.584