Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0647 ATGCTCTCCATGGATTCCCTTTTGGATAGTTTCCCTGGTTCTGCAAATGGATTTATATTTGAAAACGGTTCTGACTCGTTGTTTATGAATCAGAACAGGGCAAGTGAGTTCAAGTTGGATGATTCACGTTCCCCTTCAGAGTCTGCAACTGATTATGCTCCCTCTTCTGGGACAAGCTCTGATGGAGAACACGCAGAGAGTACTAAACACTTCAATCCCATTCTCAGGTACATAAGTGATATCCTTATGGAAGAAGAGGATGATTTGGAGCGCAAACCCTGCATGTTGCAGGATTGTTTGAGACTCCAGGCTGCTGAAAAATCATTCTATGATGCTTTGGTTCGTAGTCACCCATCATCACCTCGTCAATTTAATGATAGCCCTGACCCAGATGATAATTTTGGTGGAACCACTAGTTCTGAGAGTTACAGCAGTTATACCACTGACAATTCATGTGAGTCTGATTGGTTTAACGGTGCTGGTGATTTTGAGTCTTCTTTCCTGCAAAGATCGCTGCATAATTCTCCGGAACACGCTTATGTTGCTCCTGATCTGATTAGAGAGGCACAAGCTGGGTTCCATTTTTCAAATGGAGCCTGGAAGTTGATTCAGTCGCAGAACAAGGCAGGCGTGGTTGAAGAGGGTGTGACGAGGACAGGCAAAGGATCAAGGGAGAAGAGGAGCCATCTCATGAACGATGATGTCTCACATGAAGAAGAGGAGAGAAGCAATAAGCTTTCAGCTGTGTATTCTGATGATTCGGAGCCATCTAGCATGTTCGATGAAGTGCTGCTTTGCAAGGATGGTAAGAGTCCAGCCGTTTTTAAGTCTGACCGTGAACCGTCGTCATCACAGAGTGCTGAGTCGGGAGGATCTAATGGGAAGACAACACGTTCGAAGAAAGGTTCCAACAAGGGAAAAAGTGCAAGAACAACAGTGGATTTATGGACTTTGCTATCTCAATGCGCACAAGCTGTGGCTAGCTTTGACCCGAGGAGTGCAAATGAAATCCTGAAGCAGATTAGGCAGCACTCTTCACCTTTAGGCGATGGACTTCAGCGTCTGGCTCACTACTTTGCCGATGGCCTAGAGACAAGGTTAGCTGCTGGAACACCAAAGTTCATGCTCTTTCAGTCAGCATCTGCTGCAGACATGTTGAAAGCTTACCGAGTGTATGTCACATCATCACCATTTCACTGGATGTCATATTTCTTGGCTAACCGTACTATTCGGAAGTTATCACAAAGTGAAAGCAGTCTTCACATTATTGACTTTGGGATTAGCTATGGTTTCCAGTGGCCTTGCCTAATCCAAGGGCTTTCAGAGAGAACAGGCGGTCCTCCAAGACTTCGTATAACAGGAATCGATCTTCCTCAGCCAGGATTTAGGCCAGCAGAAAGGGTAGAGGAGACGGGGCGGCGCCTAGAGAAGTACTGCAAGAGGTTTGGGGTCCCGTTTGAGTACAATTGCCTTGCTCAGAAATGGGAAACTATAAGACTTGAGGATCTCAAACTTGATAGGAGTGAAGTTACTGTGGTTAACTGTTTGTACAGATTGAAGAACCTGTCGGATGAAACTGTGACAGCAAACTGTCCAAGGGATGCTGTGCTGAGGTTGATCAGGAGGATCAATCCAACCATCTTCATGCACGGGGTTGTGAATGGCACCTACAATGCACCATTCTTCCTGACAAGGTTCAGGGAAGCACTCTTCCACTTCTCAGCCTTGTATGATATGTTTGAAGCTAATGTGCCTCGGGAAGATCCATCTAGGCTTATGTTTGAGAAAGGGCTGTTTGGAAGGGACGCAATCAATGTCATAGCATGTGAGGGGGCAGAGAGGGTTGAAAGGCCAGAGACCTACAAGCAATGGCAGGTTAGGAACCAGAGAGCAAGGTTCAAGCAACTTCCATTGGCCACAGAGCTCGTGAAAAGAGTAAAGGAAATGGTGAAGAAGGAATATCATAAAGATTTTACAGTTGATGAGGATGGCAAGTGGGTTTTGCAAGGATGGAAAGGGCGTATTCTATTTGCTCTTTCTTCTTGGGTTTCTGCTTGA 2058 0.4577 MLSMDSLLDSFPGSANGFIFENGSDSLFMNQNRASEFKLDDSRSPSESATDYAPSSGTSSDGEHAESTKHFNPILRYISDILMEEEDDLERKPCMLQDCLRLQAAEKSFYDALVRSHPSSPRQFNDSPDPDDNFGGTTSSESYSSYTTDNSCESDWFNGAGDFESSFLQRSLHNSPEHAYVAPDLIREAQAGFHFSNGAWKLIQSQNKAGVVEEGVTRTGKGSREKRSHLMNDDVSHEEEERSNKLSAVYSDDSEPSSMFDEVLLCKDGKSPAVFKSDREPSSSQSAESGGSNGKTTRSKKGSNKGKSARTTVDLWTLLSQCAQAVASFDPRSANEILKQIRQHSSPLGDGLQRLAHYFADGLETRLAAGTPKFMLFQSASAADMLKAYRVYVTSSPFHWMSYFLANRTIRKLSQSESSLHIIDFGISYGFQWPCLIQGLSERTGGPPRLRITGIDLPQPGFRPAERVEETGRRLEKYCKRFGVPFEYNCLAQKWETIRLEDLKLDRSEVTVVNCLYRLKNLSDETVTANCPRDAVLRLIRRINPTIFMHGVVNGTYNAPFFLTRFREALFHFSALYDMFEANVPREDPSRLMFEKGLFGRDAINVIACEGAERVERPETYKQWQVRNQRARFKQLPLATELVKRVKEMVKKEYHKDFTVDEDGKWVLQGWKGRILFALSSWVSA* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0647 685 MobiDBLite consensus disorder prediction 277 299 - -
Pvu11g0647 685 MobiDBLite consensus disorder prediction 46 62 - -
Pvu11g0647 685 MobiDBLite consensus disorder prediction 118 146 - -
Pvu11g0647 685 MobiDBLite consensus disorder prediction 218 248 - -
Pvu11g0647 685 MobiDBLite consensus disorder prediction 272 308 - -
Pvu11g0647 685 MobiDBLite consensus disorder prediction 37 67 - -
Pvu11g0647 685 ProSiteProfiles GRAS family profile. 306 683 IPR005202 -
Pvu11g0647 685 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 36 684 IPR005202 -
Pvu11g0647 685 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 36 684 - -
Pvu11g0647 685 MobiDBLite consensus disorder prediction 116 146 - -
Pvu11g0647 685 MobiDBLite consensus disorder prediction 208 255 - -
Pvu11g0647 685 Pfam GRAS domain family 317 682 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0647 Pvu-Chr11 5460410 5462467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0647 4 683 GRAS Transcription Factor Family AT2G29060 44.029 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu11g0647 GRAS 1.1e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0647 - - gmx:100815586 1144.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1499 5 37374967 37377398 Pvu11g0647 11 5460410 5462467 PCT