Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0638 ATGGGCGAAGAGGTGAAGACGAGCGAGTACGACGAAGAGCGCGTAATGGAGTGGGAGGTGGGTCTCCCCACTGCCAACGATCTCACCCCTCTCTCTCAGCCGCTGATTCCGCCGGAGCTTGCCAACGCCTTCAGCATATCGCCGGAGCCCCACCGCACCACCCTAGACGTCAACCGCGCCTCGCGCAACACGCTCTCTACGATCCGCGGCGGCGGGAGTGTGCACCAGGCCTTCTCCTCCTCCAACAATCACCACCACGAGGAGGAGGAGGAGGACGAGGACGAGGACACCGATCGCGACGGCTCGGGGTCCGATTCCCGGAAGCATCGGAAGATCGAGTGCGTGGCGGAGGAGGCGGACTCGGCTGTGCGGACTGAGAACTCGGCGGAGCGGACGGCGGTGAAGCGGCCGCGGCTGGTGTGGACCCCGCAGCTGCACAAGCGGTTCGTGGACGTGGTGGCGCACCTTGGGATCAAGAACGCGGTGCCGAAGACGATTATGCAGTTGATGAACGTGGAAGGGTTGACCCGGGAGAATGTGGCGAGCCATCTTCAGAAGTATCGGCTTTACCTGAAGCGGATGCAGGGTCTCTCCAACGAAGGTCCTTCTTCATCGGATCAGTTATTTGCTTCCACACCTGTGCCTCAGAGTTTGCACGACTCAGCTCCTCCCAGTGCCCATTCCCATGGTCACTCCCATGGCCATGCCAGTGCTCATCTCCCTGTTCCCATGATGTCCATGCCCTATCCCCCTCCCATGATGTCCATGCCTGTCCTCGGCATGCCCCATGCCCATGGTCACATGGGCATCACTATGCCTACTTCTTCCGCCACCTCAGCTTACCATCCTTACAACATGCTGCACCAAAGGGATTGGACTCACCTTGCTCCCAGTGATAAATGA 903 0.6035 MGEEVKTSEYDEERVMEWEVGLPTANDLTPLSQPLIPPELANAFSISPEPHRTTLDVNRASRNTLSTIRGGGSVHQAFSSSNNHHHEEEEEDEDEDTDRDGSGSDSRKHRKIECVAEEADSAVRTENSAERTAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHDSAPPSAHSHGHSHGHASAHLPVPMMSMPYPPPMMSMPVLGMPHAHGHMGITMPTSSATSAYHPYNMLHQRDWTHLAPSDK* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0638 300 MobiDBLite consensus disorder prediction 197 239 - -
Pvu11g0638 300 MobiDBLite consensus disorder prediction 197 223 - -
Pvu11g0638 300 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 293 - -
Pvu11g0638 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 192 IPR017930 -
Pvu11g0638 300 MobiDBLite consensus disorder prediction 65 111 - -
Pvu11g0638 300 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 137 189 IPR006447 GO:0003677
Pvu11g0638 300 MobiDBLite consensus disorder prediction 65 80 - -
Pvu11g0638 300 SUPERFAMILY Homeodomain-like 134 193 IPR009057 -
Pvu11g0638 300 Pfam Myb-like DNA-binding domain 140 188 IPR001005 -
Pvu11g0638 300 Gene3D - 132 195 - -
Pvu11g0638 300 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 293 IPR044841 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0638 Pvu-Chr11 5372355 5375080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0638 1 220 G2-like Transcription Factor Family AT3G46640 61.570 1.08e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu11g0638 Myb_DNA-binding 1.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0638 - - aprc:113858844 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0638 11 5372355 5375080 Pvu11g0638 11 5372355 5375080 ECH