Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0629 ATGGAAAACGGGAAAGCCCCTATTGTGGGGGAAGAGAGGATAATGCAGGAAATTGATAGTCCCATTGCCTCTGAAACACTTGATGTTCTTCGTATGAAGGCAGAGTTATCTTGCAGTTCTGGCTGTCCTTTTTCTGGACATGAAAATAGTGTTGTGACATCAAACGAGTCTTCAAAGTCGGCAAAGAAGCTTTCTGGACTTATTGTTTTCTATGCTATTGTCATGGTTGTGGAACTTGTTGGTGGAATAAAAGCTCACAGCCTAGCTGTCATCAGTGATGCAGCACACTTGCTTTCTGATATTACAGGATTCTCTATCTCTCTCTTTGCAGTGTGGGCTTCAGGTTGGGAGGCAACACCACATCAATCTTTCGGATACAGTCGTCTCGAGGTTTTGGGGGCTCTTATATCTGTGCAGTTAATTTGGTTGATAGCTGGTTATTTGATATATGAAACAATTGGTAGAATTCTTGTACAAAATACCAGTGTGAATGGAAAGCTCATGCTTGCAATTGCAACACTTGGGTTTGTTCTTAACTTTATCATGGTTGCATGGATTGGTCATGATCATGGTCATGGCCATCATGGTCATGGTCATAGTCATCATGATCATCATAGTCATGGTCATGGTCATCATCAATGCCAGACAGATCATGATGATGGGGATAAGGAGCTATCTATAATAAGTGATGAGGAGAATGTTACCCTGGTTTCAACTAGTCACAGAAATACTAATGTCTTGAACATAAATCTTCAGGGGGCGTATTTGCATGTCATGGCTGATATGATTCAATCTGTTGGAGTGATGATTGCTGGAGCCATAATATGGGCTGAACCTAAGTGGTTTATAGTTGACCTTGTGTGCACTCTTATATTCTCTGTTTTATCTTTAAGTACTACTCTGCCCATGCTTAGGAATATTTATGGCATTCTCATGGAAAGGACACCAAGTGAGATAGATATTAGCAAGTTGGGAAGTGGCATTAGAAATATCAAGGGAGTACGGGATGTTCATGACTTGCACGTTTGGGCTATAACTGTTGGAAAACTTGTTCTTTCTTGCCATGTAGTGGCTGAGCCTGGCATAAGTTCCATTGATTTACTAGGCGCTATTAAACATTACTGTGAAAAAACATATCAAATACAGCATGTTACCATACAAATTGAATAA 1170 0.4026 MENGKAPIVGEERIMQEIDSPIASETLDVLRMKAELSCSSGCPFSGHENSVVTSNESSKSAKKLSGLIVFYAIVMVVELVGGIKAHSLAVISDAAHLLSDITGFSISLFAVWASGWEATPHQSFGYSRLEVLGALISVQLIWLIAGYLIYETIGRILVQNTSVNGKLMLAIATLGFVLNFIMVAWIGHDHGHGHHGHGHSHHDHHSHGHGHHQCQTDHDDGDKELSIISDEENVTLVSTSHRNTNVLNINLQGAYLHVMADMIQSVGVMIAGAIIWAEPKWFIVDLVCTLIFSVLSLSTTLPMLRNIYGILMERTPSEIDISKLGSGIRNIKGVRDVHDLHVWAITVGKLVLSCHVVAEPGISSIDLLGAIKHYCEKTYQIQHVTIQIE* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0629 389 MobiDBLite consensus disorder prediction 195 222 - -
Pvu11g0629 389 SUPERFAMILY Cation efflux protein transmembrane domain-like 62 313 IPR027469 -
Pvu11g0629 389 TIGRFAM CDF: cation diffusion facilitator family transporter 64 389 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Pvu11g0629 389 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 316 389 IPR036837 -
Pvu11g0629 389 MobiDBLite consensus disorder prediction 195 209 - -
Pvu11g0629 389 Gene3D Cation efflux protein transmembrane domain 61 311 IPR027469 -
Pvu11g0629 389 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 8 389 - -
Pvu11g0629 389 PANTHER METAL TOLERANCE PROTEIN B 8 389 - -
Pvu11g0629 389 Pfam Cation efflux family 68 312 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0629 Pvu-Chr11 5299336 5301108 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0629 16 389 Inorganic Solute Cotransporters AT2G29410 48.396 2.62e-116 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0629 K14689 - gmx:100777590 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0629 11 5299336 5301108 Pvu11g0629 11 5299336 5301108 ECH