Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0616 ATGGCCTCTGTAGCACTCACCACCACCCTCCCCTCTCTCCGCCTCCGCCGCAGCACCACCACCGCCGTGGCCCTCAAACCCAATCGTCTCACTTCTTTTCCAGCTTCCTCACTGAAACCAAACCTCACCACTTCGATTTCCTCCATCCCAAATTTCTCACTTAAAAAAACAAACCTCGTTTTCAATCGCAAGCACTCTTCTCTCACTGTTAGAGCTACCGTAGCTCCCATCACTCCGGCGCCGACACCGGCTCCGGTTCAGCCATGGCAAGGCGCTGCAATAAAACCCCTATTAGCCTCCATCGCCACGGGAGTGATACTTTGGTTCACACCAGTTCCCGCGGGCGTGAACCGTAACGCGTGGCAATTACTCGCGATCTTCTTAGGCACAATCGTCGGCATTATAACCCAACCGTTGCCCCTCGGCGCGGTAGCGATATTAGGTTTGGGCGTTTCCGTTCTCACCAAAACCCTACCGTTCGCCGCGGCGTTCTCCGGCTTTGGTGACCCGATCCCCTGGCTCATCGCTCTCGCCTTCTTCTTCGCCAAGGGATTCATCAAAACTGGGCTCGGGAACCGTGTTGCGTACCAGTTCGTGAAGCTCTTCGGCAGCTCCTCCCTCGGGTTAGGTTACAGCCTCGTCTTCAGCGAGGCGCTGCTGGCGCCGGCGATTCCCTCGGTGTCGGCGAGAGCTGGCGGGATATTCCTCCCGCTCGTGAAGGCGCTGTGCGTGGCGTGCGGGAGCAACGTCGGCGACGGGACGGAGACCAAGTTGGGAGCGTGGCTCATGCTCACGTGCTTTCAGACTTCGGTGATTACGTCGGCGATGTTTCTGACGGCCATGGCGGCGAATCCACTCTGCGCGACGCTGACGCTAAATTCCATTAACCAGACGATTGGGTGGTTGGATTGGGCCAAAGCTGCAATTGTCCCTGGCTTGGCGTCGTTGGTGTTGGTTCCGTTGATTTTGTACGTTATATACCCTCCGACTCTGAAGAGTAGTCCTGATGCTCCTAAGCTTGCGAGAGAGAAGTTGGCGACAATGGGGCCCATGACAACCAATGAGAAGATCATGACTGCTACTCTGTTTCTCACGGTAGGACTCTGGGTATTTGGAGGAGTTCTTAATGTTGATGCTGTATCTGCTGCAATTCTTGGATTATCTGTACTTCTTGTCACAGGGGTTGTTACATGGAAGGAGTGCTTAGCGGAAGGAGTTGCCTGGGATACTCTCACATGGTTTGCTGCCCTCATAGCAATGGCTGGGTATTTGAACAAATATGGCCTCATTTCTTGGTTCAGTCAAACGGTAGTCAAGTTTGTTGGTGGATTGGGTCTATCATGGCAACTATCTTTTGGGATTCTAGTCCTTCTCTACTTTTACTCACATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGCGCCATGTTTACTGCATTTTTGTCTGTTTCCACTGCTCTGGGGACTCCACCTTTCTTCGGAGCCATAGTGCTGTCGTTCCTCTCCAACCTTATGGGTGGCCTTACTCATTACGGAATTGGATCAGCTCCTGTGTTTTTCGGTGCCAACTATGTTCCCCTTGCTAAATGGTGGGGTTATGGATTCCTCATTAGTATTGTTAACATTGTAATCTGGCTTGGACTCGGAGGAGTTTGGTGGAAATTCATTGGCTTGTGGTAA 1680 0.525 MASVALTTTLPSLRLRRSTTTAVALKPNRLTSFPASSLKPNLTTSISSIPNFSLKKTNLVFNRKHSSLTVRATVAPITPAPTPAPVQPWQGAAIKPLLASIATGVILWFTPVPAGVNRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLPFAAAFSGFGDPIPWLIALAFFFAKGFIKTGLGNRVAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKALCVACGSNVGDGTETKLGAWLMLTCFQTSVITSAMFLTAMAANPLCATLTLNSINQTIGWLDWAKAAIVPGLASLVLVPLILYVIYPPTLKSSPDAPKLAREKLATMGPMTTNEKIMTATLFLTVGLWVFGGVLNVDAVSAAILGLSVLLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVSTALGTPPFFGAIVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFLISIVNIVIWLGLGGVWWKFIGLW* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0616 559 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 9 559 IPR030676 -
Pvu11g0616 559 CDD ArsB_NhaD_permease 131 553 - -
Pvu11g0616 559 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 111 553 IPR001898 GO:0016020|GO:0022857|GO:0055085
Pvu11g0616 559 Pfam Sodium:sulfate symporter transmembrane region 96 559 IPR001898 GO:0016020|GO:0022857|GO:0055085
Pvu11g0616 559 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 9 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0616 Pvu-Chr11 5215699 5219304 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0616 10 558 Antiporters AT5G12860 80.143 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0616 - - vun:114169835 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0616 11 5215699 5219304 Pvu11g0616 11 5215699 5219304 ECH