Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0597 ATGGACCATGACAAGACTGGGTGCCAAGCTCCTCCCGAAGGTCCTATACTGTGCATCAACAACTGTGGTTTTTTTGGAAGTGCAGCTACCATGAATATGTGTTCTAAATGCCACAAAGACATGTTACTTAAACAGGAGCAGGCAAAGCTTGCAGCATCGTCCATTGGGAATATTATGAATGGGTCATCTAGCAGCACTGAAAATGAACCTGTTGTTGCTGCTGCTGCTAATGTTGAAATCCCAGTTATTTCAGTAGAGCCAAAAACTTTCTCTGTGCAACCTTTATTTGGTTCAGTTTCAGAGGGGAGTGAGGAGGCAAAGCCGAAGGATGGTCCAAAACGTTGCCTCAGCTGCAATAAGCGAGTTGGTCTGACAGGGTTTAATTGTCGATGTGGCAATCTTTTTTGTGCTGTACATCGCTATTCAGACAAGCATAATTGCCCGTTTGATTACCGCACTGCTGCTCGGGATGCCATAGCTAAAGCAAACCCAGTTGTCAAGGCTGAGAAGCTTGATAAGATCTAA 525 0.4476 MDHDKTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMLLKQEQAKLAASSIGNIMNGSSSSTENEPVVAAAANVEIPVISVEPKTFSVQPLFGSVSEGSEEAKPKDGPKRCLSCNKRVGLTGFNCRCGNLFCAVHRYSDKHNCPFDYRTAARDAIAKANPVVKAEKLDKI* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0597 174 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 174 - -
Pvu11g0597 174 PANTHER ZINC FINGER AN1 DOMAIN STRESS-ASSOCIATED PROTEIN 1 174 - -
Pvu11g0597 174 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Pvu11g0597 174 SUPERFAMILY AN1-like Zinc finger 101 169 IPR035896 -
Pvu11g0597 174 SMART AN1_Zf_4 115 152 IPR000058 GO:0008270
Pvu11g0597 174 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Pvu11g0597 174 ProSiteProfiles Zinc finger AN1-type profile. 109 155 IPR000058 GO:0008270
Pvu11g0597 174 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Pvu11g0597 174 Gene3D - 97 170 IPR035896 -
Pvu11g0597 174 Pfam AN1-like Zinc finger 117 151 IPR000058 GO:0008270
Pvu11g0597 174 Gene3D - 4 70 - -
Pvu11g0597 174 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0597 Pvu-Chr11 5024589 5026511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0597 8 174 C2H2 Transcription Factor Family AT3G52800 42.690 1.26e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0597 - - gmx:100499857 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0597 11 5024589 5026511 Pvu11g0597 11 5024589 5026511 ECH
Pvu7g2640 7 49454306 49456212 Pvu11g0597 11 5024589 5026511 ECH