Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0595 ATGGATTCAGCGAGAACAGCTCCTCCAATGTTGCAGGAGCAGGAGCAGGAGCTGGAGCTGGACAACCTCAAAGCCCTCAAAGTCCTCGGAAAAGGTGCCATGGGGACTGTCTTCCTCGTCCACCAGACCACCAACAACTCCACCTTCGCCTTGAAAGTGGTGGACAAAACGAGCGTCCACGCTAAGCTCGACGCGGAGCGCCGCGCGCGTTGGGAAATCCAAGTCCTCTCAACGCTCTCCCATCCCTTCCTCCCTTCCCTCATGGGAACATTCGAGTCCCCACAGTTCTTAGCGTGGGCCCTACCCTACTGCCCCGGCGGCGACCTCAACGTTCTCCGCTACCGCCAAACAGACCGCGCCTTCTCCCCCACCGTCATCCGCTTCTACGTAGCGGAAATCCTCTGCGCGCTCCACCACCTCCATTCCATGGGAATTGCATACCGCGACCTCAAACCCGAAAATGTCCTCATCCAAAACAACGGCCACGTCACCCTCACGGATTTCGACCTCTCCCGCAAACTCACTCTCAAGCCTAAACCCCTTCTTCCTTCGATCCCCGTGCCCAATCTCAACCTGCCAGAACCCCGCCGCAAACACCGCCGCAACTTCTCCCGCTGGATCCCCCTCCGCGCCCTCGACGGGAATCGTAGGAAGGCCAACTCCAACGCCCTTAAGAAGGCCAAGTCCGCGCGAGTCAGCCCGGTGAGTAGACGGAAACTGAGTTTCTCCAACGGCGAGCGCTCCAACTCGTTCGTCGGAACCGAGGAGTACGTATCGCCGGAGGTCGTCCGCGGCGACGGGCACGAGTTCGCCGTTGATTGGTGGGCCCTCGGGATACTCATCTACGAAATGCTCTACGGTACGACGCCGTTTAAAGGCAAGAATCGCAAGGAAACGTTCCGCAACGTCCTCACCAAGGCACCGGAGTTCGTCGGGAAGAGAACCGCGCTCACGGACCTTATCGAGAAGCTCCTGGCGAAGGATCCGACGAGGCGGTTGGGCTACACGCGCGGCGCTGCGGACATCAAGGAGCATGAGTTCTTCCGAGGGGTGAAGTGGGAGCTTTTGACGGAGGTGGTGCGGCCGCCGTTCATTCCGTCGAGGGACGACGTGTCCGTTGAGTCGATGGAGAGGCTTTCCGCCGGGAATTCTGGCATGGATATTAGGGATTACTTTCAGAATCTGAGATCGTTGCCACCTTCGCCGTCACCGTCGGCATCGCCGCGGTGGAGGTTTAAGAAAAATGTTTCTCTAACGGAATTCTAA 1266 0.5877 MDSARTAPPMLQEQEQELELDNLKALKVLGKGAMGTVFLVHQTTNNSTFALKVVDKTSVHAKLDAERRARWEIQVLSTLSHPFLPSLMGTFESPQFLAWALPYCPGGDLNVLRYRQTDRAFSPTVIRFYVAEILCALHHLHSMGIAYRDLKPENVLIQNNGHVTLTDFDLSRKLTLKPKPLLPSIPVPNLNLPEPRRKHRRNFSRWIPLRALDGNRRKANSNALKKAKSARVSPVSRRKLSFSNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILIYEMLYGTTPFKGKNRKETFRNVLTKAPEFVGKRTALTDLIEKLLAKDPTRRLGYTRGAADIKEHEFFRGVKWELLTEVVRPPFIPSRDDVSVESMERLSAGNSGMDIRDYFQNLRSLPPSPSPSASPRWRFKKNVSLTEF* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0595 421 ProSiteProfiles Protein kinase domain profile. 23 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0595 421 SMART serkin_6 23 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0595 421 Gene3D Transferase(Phosphotransferase) domain 1 108 174 - -
Pvu11g0595 421 Gene3D Transferase(Phosphotransferase) domain 1 245 367 - -
Pvu11g0595 421 PANTHER FLIPPASE KINASE 1-RELATED 18 400 - -
Pvu11g0595 421 Pfam Protein kinase domain 243 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0595 421 Pfam Protein kinase domain 25 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0595 421 SUPERFAMILY Protein kinase-like (PK-like) 20 402 IPR011009 -
Pvu11g0595 421 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Pvu11g0595 421 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 18 400 - -
Pvu11g0595 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Pvu11g0595 421 Gene3D Phosphorylase Kinase; domain 1 23 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0595 Pvu-Chr11 4993522 4994787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0595 18 421 AGC Kinase Gene Family AT3G20830 60.723 1.14e-165 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pvu11g0595 Pkinase 4.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0595 - K08286 gmx:100785281 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1535 5 37632542 37634056 Pvu11g0595 11 4993522 4994787 PCT