Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0591 GATCTACCAATGCATCAAAGAGGGGATGCAGTGAGTAGCATGGTGTATGAGGCGAATGCCAGAGTCCGAGACCTCGTTTATGGCTGTGTTGGGGCCATCTCTTCTCTTCAGCAACAAATTGATGTGCTACAGACCCAATTGGCCCTGGCCCAGGCTGAGGTGGCCCACCTTAGGGTGAGACAAAATAGGCCTTTTTCAAGTTATGGGCCTAGACCCAATAGCCCAACCAATAGTGGGTTTCCATCACCCAAGACCTTGGACTCACATGCCAAGCCTATTTTTGACATGGACATGGTGATGGACCATGCCAGCTATGGGAGTTCAATGTGGTGA 333 0.5045 DLPMHQRGDAVSSMVYEANARVRDLVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRVRQNRPFSSYGPRPNSPTNSGFPSPKTLDSHAKPIFDMDMVMDHASYGSSMW* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0591 110 Pfam Lateral organ boundaries (LOB) domain 2 51 IPR004883 -
Pvu11g0591 110 MobiDBLite consensus disorder prediction 66 84 - -
Pvu11g0591 110 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 97 - -
Pvu11g0591 110 ProSiteProfiles LOB domain profile. 1 54 IPR004883 -
Pvu11g0591 110 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 2 97 - -
Pvu11g0591 110 Coils Coil 33 60 - -
Pvu11g0591 110 MobiDBLite consensus disorder prediction 61 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0591 Pvu-Chr11 4943632 4944372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0591 1 110 AS2 family AT1G31320 67.568 5.80e-31 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pvu11g0591 LOB 3.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0591 - - pvu:PHAVU_011G0575000 225.713