Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0584 ATGTCCAAAACCACCGCATCTGGCGACGGCGCTCCAGCTCTCCACTTCGATACGCCGACGCTGGACCGGGAGTTCGCGGCGCTTCTCCACACGATTTCCGAGCACGGCGGGTACGCTTACGTGAGCATGGCGGCGCTGGCGTCCGGCGGCGACATTCGGGCGGCGGAGGCGGCGCGTGAGATGGCGTGGGAGCAGCTTCACTCCGGGCCGTGGCACTCGGTGCTGCCGGTGTGGCGCGACGCGTACTCCATGGCGTGCCTCCACGTGGCGGGACACCACTACGGCAACGGCGAGTTCAGGGAGGCGCTTAGGGTTTTGGATTTGGGAATCATCATGGGAGGAACGCTCCTCCGCAAGGATTTGGACTCCGCCGTCTCGAAAGTGTCGGAACAAACTCGAAGGCGCGTTAGGGTTTCTGATTTGGGGGGCTCGGAGCACCGGCTCGTGGATCGGGAATTTGATGTGGCGGAGGTGGTCCAACTTTTACCAATGAAGTCTCTTTCTTCTAAGCTTGTGGAGAAGAAGTCAGCGCTGTCGTTGGATAAATTCCTGAAGGATCATTACCTGTCTCGCTCTCCGGTTATTATCAGCGACTGTATGGCTCACTGGCCAGCCAAGGCGAAATGGAATGATGAAGATTACTTGTTGAGAGTTGCCGGTGACCGCACAGTTCCGGTTGAGGTTGGGAAAAACTATTTATGTACTGAGTGGAAGCAAGAGCTCATTACTTTTTCAGAATTTATTCAGCGGATAAAGTCTGATGCCTGTTCTCCTGGTGGTCCTACATATCTTGCTCAGCATCCATTATTTGACCAGATAAATGAGCTGCGGAGAGATATTTTTATTCCTGACTATTGTTTTGCTGGTGGAGGGGAGCTACGATCTCTCAATGCTTGGTTTGGTCCAGCAGGAACAGTAACACCATTACACCATGATCCGCATCATAACATACTAGCTCAGGTTGTTGGAAAAAAATACATTAGGCTTTACTCGTCATCTTTGTCTGAGGAACTTTCCCCCCACTCTGGTACCATGCTCAGCAATTCCAGCCAGGTTGATTTAGATGATGTAGATGAAACGAAGTTTCCCAAGGTGCAAGAGTTGGAATTTGTAGACTGTATTTTAGAGGAAGGCGAAATGCTATATATCCCGCCAAAATGGTGGCACTATGTGCGATCTTTGACTACGAGTTTTTCAGTTAGCTTTTGGTGGAGTGAGGGTGACAGTTCGGATGCATCCTAA 1242 0.5161 MSKTTASGDGAPALHFDTPTLDREFAALLHTISEHGGYAYVSMAALASGGDIRAAEAAREMAWEQLHSGPWHSVLPVWRDAYSMACLHVAGHHYGNGEFREALRVLDLGIIMGGTLLRKDLDSAVSKVSEQTRRRVRVSDLGGSEHRLVDREFDVAEVVQLLPMKSLSSKLVEKKSALSLDKFLKDHYLSRSPVIISDCMAHWPAKAKWNDEDYLLRVAGDRTVPVEVGKNYLCTEWKQELITFSEFIQRIKSDACSPGGPTYLAQHPLFDQINELRRDIFIPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYSSSLSEELSPHSGTMLSNSSQVDLDDVDETKFPKVQELEFVDCILEEGEMLYIPPKWWHYVRSLTTSFSVSFWWSEGDSSDAS* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0584 413 Pfam Cupin-like domain 182 406 IPR041667 -
Pvu11g0584 413 SMART cupin_9 262 412 IPR003347 -
Pvu11g0584 413 PANTHER - 36 406 - -
Pvu11g0584 413 SUPERFAMILY Clavaminate synthase-like 175 405 - -
Pvu11g0584 413 ProSiteProfiles JmjC domain profile. 256 413 IPR003347 -
Pvu11g0584 413 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 36 406 - -
Pvu11g0584 413 Gene3D Cupin 171 405 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0584 166 404 Acyl Lipid Metabolism Gene Families AT3G45880 23.986 4.71e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pvu11g0584 Cupin_8 1.1e-46 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0584 K24444 - gmx:100813075 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0584 11 4879012 4882844 Pvu11g0584 11 4879012 4882844 ECH