Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0582 ATGGATCTAGAGAGATCAATAGAGGACCAGTTCTCCAAATTACACCCTTCCCTGCCAGAAAACACCAGAATTGGAATAGTCGGTGCTGGTCCAAGTGGCTTATCAGCAGCTTATGCGCTAGCCAGGCTTGGTTATAAGAACATCACAGTCTTGGAGAAACATCATACGGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTATGATCTGGGTGGGCAAGTTCTTGCAGCAAACAGTGCTCCAGTCATTTTTCACTTGGCAAGAGAGACAGCCTCTGAACTAGAAGAATTGGACTCACACAAGCTTGCTGTCATTGGTCATTCCACTGGAGAATATCAAGATATTAAAGTTGCTGATGATTATGTATCAGTTATGTCACTCACATTGAAAATCCAAGAAAAGGTGAAGAATTGTAATCGTATTGGGGTCCATGCTGTCAGTGACATTACTTCAGACTTAACTCCAGAATTTCTTGAGCATCATGGACTCAAATCTGTTCCTAAATCTGTAGCTTATGGTTACACGGCTTCAGGATATGGATTTATTCAAGACATGCCTTATGCCTACCTTCATGAATTTACTAGAACGTCCATGGCTGGAAAAATTCGACGATTCAAAAATGGATATACTAGTCTTTGGCAGAAGATTGCTGAATCGCTTCCCTTAAAACTTTGCTGTCAAACTGAAGTATTGGCAATCAGGAGGAACTCTGATGGTGTCACTGTTAAGACCAAGAGCTTAAATCAAGTTGAAACTCTGGAATTTGATAAGATAATAATCTCGGGCTCATTTCCATTAAAATATGGAAGAACTTACCGATCATTTCCTTCAACTTGCATAGATTGTGAAACAGAAGTAATGGATGCAAGTGACCTTGAAAAGGAATTGTTCAGCAAAGTAGAGACAAATGACTACTACACCACTGTTTTAAAGATTAACGGGCTGGAACATTTGCCTGTTGGATTTTATTATTTTAGTGAATATATGGAAGACCCCAGCACAATAGGACATCCAGTTGCAATGCAAAAATTTTATGCTGGCACTAATATATTCTTATTCTGGTCCTATGGAAACTCTGTTGATATTAAGGGACCAGCAGTCATGGAGCTTGCGATCAAGACAATAGAAGCCATGGGGGGAGAAGTTGAGAAAGTCGTTCTTCAACGCCGCTTTATGTACTTTCCTCATGTTAGTAGCCAAGATATGAAAGATGGGTTTTATGAAAAGTTGGAATCAAAGCTTCAAGGTTCAAGAAATACTTACTATGTGGGCGGACTTATGGCGTTTGAGCTTACAGAGAGAAATTCATCTTATGCCATGGCTCTCATCTGCAAGAACTTTGCACATAGCAATGATTTGCCAACATTTCCTTATACTAAGATGTTGTTTCCCTTGCAAACCGAGTGCCAGAAAAAGAATCCTAAAGAATTAGGTGAATTGGCAGAAGTGCAATTTCCTAATTTGCCTACTTTGAATAGCTACTTGAAGCACTGGGGAACTCATCCAATCACTCAAAACAGGATTCTCTATTCTTGGATTAATGAAGAAGGGACTCCAGTATGCCGCAGGACCTACAGAGAACTATATTTTAATTCTTCTTGCATTACTCATAAGCTTGTAACAAGCCAAAAGCCGGTTTTGAAGCCAGGTGACAAGGTTCTCCTGGTCTATGTCCCCGGTTTGGATTTTATTGATGCCTTCTTTGGATGCCTAAGAGCTAAAGTCATACCAGTCCCAATTCTTCCTCCAGATCCCATGCAAAGAAATGGACAAGCACTAAAGCAAATTGAAAATATTGCCAAGTCATGTAGCATTGTGGCAATTTTATCAACAGTAGCTTATCACTCAGCAGTCCGTGCAGGTTCGTTCAAAAATTTAATCTCATTCATTGGAAAAAATGAGAAATCCTTGGCTCGGTGGCCGAATCTTCCATGGTTGCACACTGATACATGGGTCAAGAAGTCCAAAAGTATGGTTTTGGATCATCTTGATGAACAATGTGAACCTGAGCCAGGTGATATATGTTTCTTTCAATTTACCTCAGGTTCAACTAGTGATCCTAAAGGAGTCATGATCACTCATGGTGGGATAATTCACAACGTAAAGTTGATGCGAAGAAGATACAAGAGCACCTCAAGGACAATGCTAGTAAGCTGGCTTCCTCAGTATCATGACATGGGACTGATTGGGGGACTTTTTACATCTCTTGTTAGTGGTGGATCTGCAGTATTATTTTCGCCAATGACATTTATCAAGAAACCACTCTTGTGGCTTGAAGTTATTAGCAAGTACCAAGCAACTCATAGTGCTGGCCCCAACTTTGCCTTTGAGTTAGTGATTCGAAGATTGGAGTCTGACAAGGATAAGCTTCATAATTTAGACCTTTCGTCCTTGACTTTTCTTATGGTTGCTGCTGAACCAGTCAGACAGAAGACCCTGAAAAGATTTATTGAGCTAACCAGTCCATTTGGATTATCTGAAAAGGTGATGGCGCCTGGATATGGCTTAGCAGAAAATTGTGTGTTTGCCTGTTGTGCATTTGGAGAAGGTAAGCCAATCATTGTTGATTCGCAGGGAAGAGTTTGTTGTGGTTATGTTAATCACGACGATGCAGATATTGACATTAGAATAGTTGATCCAGAAACTTTTAAAGAGCTTCATGAAGATGGAAAGGAGGGAGAAATCTGGATTAGTAGTCCTAGTGCAGGAATAGGATACTGGGGAAGGGAAGAATTGAGTCGAAAAACTTTCAGGAATGAACTTCATAACCTTCCTGGACGTAGCTACACAAGAACTGGAGACTTGGGACGAATAATTGATCAGAATCTATTCATCACTGGAAGAATCAAAGATCTTATCATTGTTGCTGGAAGAAATATTTACTCAGCGGATGTTGAGAAGACAGTTGAGACTTCATCTGACATTCTTCGTCCAGGTTGCTGTGCTGTCATTGGAGTTCCTGAGGAAATTTTATCAGCAAAGGGGATTTCAACCCCAGATGGCTCTGATCAGGTAGGCTTGGTCGTGATTGCAGAAGTAAGGGATGGTAAGCCAGTCACCAAAGATGTGATTGAGAAAATTAAGACTCGTGTGGTGGAAGAACATGGAGTCAATGTTGCTTCCATCAAGTTGATCAAGCCCAGAACCATCAGCAAAACTACATCAGGAAAAATCAAGAGGTTTGAATGTGTCAAACAGTTCAGCGATGAAACACTGAGCTTGATACCAATAGGTCCAACACCTGTTTTGAGAAAGAAGTCGTTGTTAAGTCCGTTTACTACAGGAATGTTGAGAGAAGAAAAAACACCAGGGCTACTTGCATCCAGGAAAAGTATAAGTAAGAATGAAATTGTCGAGTTCTTGAAAGGGCTAATATCTGAGCAGACTGGAATCTCAGTCAACAACATCTCAGTCACAGACAACTTGACATCATATGGAATTGACTCAATTGGTGTGGTTAAAGCAACTCAAAAACTATCAGATTTCTTAGCAACTCCAATTTCAGCCATAGATGTTTTCACTGCATCCTGCATTCTAGAATTGGCTAACTTCTGTGAAGATCTTCTATCAAAGTCTCAGCCTCAACTTACAAGCAATTCATCCAATGTTCCAGAAGCTCAGACTGGTTCCACTGAATTGATTGTGGAGGTATCCAAGTCTTGCCAGTTTGTTTTACTTGATACGGTTGACATCACTGACCCATCTTTGGTGTCAATTGGAGATCAAGTTATCATTGCTGAAGGTGTTTTGGTTCAAAGCCACGAGGTAAAGAATGGAATTTTATGTTTCAATCCTATTAGGATTGGCAAATGTTCTTCCATTGGACCTTATGCTGTTATCCAAAAGGGAAGTGTTATTGAAGAAGGTGCTGAGATACAGGCCTTGCAAAAGGTTGGACGAGACCAACATGTGCTCAAACCTGCAAAGCTTAATAATGACATTAAGAAAACAGAGCTGCCTGTTAATACCAACAAAACTGAATATGATATTATCTACCACTTTATGGGAATCTATCTTGTTGGCTTTCTCAGCTCCCTTGCTGCGGTCATTTCCTACTTCTTATATATTAGGTTCTCCAACCAATCTCTGTCACCCCAACACTTTTCATTTGTTTGCATAGGTGGGGCCTTCCATTGGATCCCGTTTACACTCGTTGCATATGCTACCATGTTTTCTGAAGTTTCATCAAACCCAATCACCTTTGCCATTTCATTTACCAGTGTCTATTTGCTTCATGGTTTCATACTCATCATTCTCACCACTGCTTTTACTCGTCTCCTCAAAACTAGTCAAAACCAAACACATTTTAAAACCTGGCTTCGATGTCAAGTGACAACTTCCTGCCACCTTAGATGTGCAAAGCTTCTCTCAGGAACAGAAGCCTTCTGCATATATCTACGCCTTTTGGGTGCCAAAATTGGTAAGCATTGTTCCATTAGAGCCATCAACTCAGTTTCAAACCCAGAGTTAATGTCAATTGGTTCTGGTGTCCATCTTGGAGATTTTAGCCGGATAATTACAGGTTTTCATTCTTCAAGTGGATTTGTTAGTGGAAAAATTGAGGTTCAGGACAATTCGGTTATTGGGAGTCAAAGTGTAGTCCTCCCTGGTTCTCTAGTCCAAAAGAATGTCATACTTGGTGCACTTTCAGTTGCTCCAATGAATTCCACACTCCAAGAGGGTGGTGTCTACATTGGATCAAAGTCCCAAGCTGTCATAAGGAATTCACGTGATGAATGGATACAAGATATGGATAAGATAAGCAAGAAAAGAGTT 4785 0.4038 MDLERSIEDQFSKLHPSLPENTRIGIVGAGPSGLSAAYALARLGYKNITVLEKHHTVGGMCESVEIEGKVYDLGGQVLAANSAPVIFHLARETASELEELDSHKLAVIGHSTGEYQDIKVADDYVSVMSLTLKIQEKVKNCNRIGVHAVSDITSDLTPEFLEHHGLKSVPKSVAYGYTASGYGFIQDMPYAYLHEFTRTSMAGKIRRFKNGYTSLWQKIAESLPLKLCCQTEVLAIRRNSDGVTVKTKSLNQVETLEFDKIIISGSFPLKYGRTYRSFPSTCIDCETEVMDASDLEKELFSKVETNDYYTTVLKINGLEHLPVGFYYFSEYMEDPSTIGHPVAMQKFYAGTNIFLFWSYGNSVDIKGPAVMELAIKTIEAMGGEVEKVVLQRRFMYFPHVSSQDMKDGFYEKLESKLQGSRNTYYVGGLMAFELTERNSSYAMALICKNFAHSNDLPTFPYTKMLFPLQTECQKKNPKELGELAEVQFPNLPTLNSYLKHWGTHPITQNRILYSWINEEGTPVCRRTYRELYFNSSCITHKLVTSQKPVLKPGDKVLLVYVPGLDFIDAFFGCLRAKVIPVPILPPDPMQRNGQALKQIENIAKSCSIVAILSTVAYHSAVRAGSFKNLISFIGKNEKSLARWPNLPWLHTDTWVKKSKSMVLDHLDEQCEPEPGDICFFQFTSGSTSDPKGVMITHGGIIHNVKLMRRRYKSTSRTMLVSWLPQYHDMGLIGGLFTSLVSGGSAVLFSPMTFIKKPLLWLEVISKYQATHSAGPNFAFELVIRRLESDKDKLHNLDLSSLTFLMVAAEPVRQKTLKRFIELTSPFGLSEKVMAPGYGLAENCVFACCAFGEGKPIIVDSQGRVCCGYVNHDDADIDIRIVDPETFKELHEDGKEGEIWISSPSAGIGYWGREELSRKTFRNELHNLPGRSYTRTGDLGRIIDQNLFITGRIKDLIIVAGRNIYSADVEKTVETSSDILRPGCCAVIGVPEEILSAKGISTPDGSDQVGLVVIAEVRDGKPVTKDVIEKIKTRVVEEHGVNVASIKLIKPRTISKTTSGKIKRFECVKQFSDETLSLIPIGPTPVLRKKSLLSPFTTGMLREEKTPGLLASRKSISKNEIVEFLKGLISEQTGISVNNISVTDNLTSYGIDSIGVVKATQKLSDFLATPISAIDVFTASCILELANFCEDLLSKSQPQLTSNSSNVPEAQTGSTELIVEVSKSCQFVLLDTVDITDPSLVSIGDQVIIAEGVLVQSHEVKNGILCFNPIRIGKCSSIGPYAVIQKGSVIEEGAEIQALQKVGRDQHVLKPAKLNNDIKKTELPVNTNKTEYDIIYHFMGIYLVGFLSSLAAVISYFLYIRFSNQSLSPQHFSFVCIGGAFHWIPFTLVAYATMFSEVSSNPITFAISFTSVYLLHGFILIILTTAFTRLLKTSQNQTHFKTWLRCQVTTSCHLRCAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINSVSNPELMSIGSGVHLGDFSRIITGFHSSSGFVSGKIEVQDNSVIGSQSVVLPGSLVQKNVILGALSVAPMNSTLQEGGVYIGSKSQAVIRNSRDEWIQDMDKISKKRV 1595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0582 1595 SUPERFAMILY ACP-like 1116 1201 IPR036736 -
Pvu11g0582 1595 ProSitePatterns Putative AMP-binding domain signature. 680 691 IPR020845 -
Pvu11g0582 1595 PANTHER AMINE OXIDASE 1226 1593 - -
Pvu11g0582 1595 PANTHER AMINE OXIDASE 1 1226 - -
Pvu11g0582 1595 Gene3D - 479 952 IPR042099 -
Pvu11g0582 1595 Gene3D - 94 202 - -
Pvu11g0582 1595 Gene3D Hexapeptide repeat proteins 1444 1595 - -
Pvu11g0582 1595 CDD FAAL 499 1072 IPR040097 GO:0008610
Pvu11g0582 1595 Gene3D - 1109 1191 IPR036736 -
Pvu11g0582 1595 Gene3D - 303 396 - -
Pvu11g0582 1595 SUPERFAMILY Acetyl-CoA synthetase-like 493 1074 - -
Pvu11g0582 1595 SUPERFAMILY Trimeric LpxA-like enzymes 1234 1307 IPR011004 -
Pvu11g0582 1595 Pfam Flavin containing amine oxidoreductase 32 267 IPR002937 GO:0016491
Pvu11g0582 1595 ProSitePatterns Phosphopantetheine attachment site. 1147 1162 IPR006162 -
Pvu11g0582 1595 PRINTS Adrenodoxin reductase family signature 23 45 - -
Pvu11g0582 1595 PRINTS Adrenodoxin reductase family signature 47 60 - -
Pvu11g0582 1595 Gene3D - 953 1079 IPR045851 -
Pvu11g0582 1595 ProSiteProfiles Carrier protein (CP) domain profile. 1118 1192 IPR009081 -
Pvu11g0582 1595 SUPERFAMILY Trimeric LpxA-like enzymes 1470 1582 IPR011004 -
Pvu11g0582 1595 PANTHER AMP-BINDING ENZYME 1226 1593 - -
Pvu11g0582 1595 PANTHER AMP-BINDING ENZYME 1 1226 - -
Pvu11g0582 1595 SUPERFAMILY FAD/NAD(P)-binding domain 20 271 IPR036188 -
Pvu11g0582 1595 Pfam AMP-binding enzyme 524 958 IPR000873 -
Pvu11g0582 1595 Pfam Phosphopantetheine attachment site 1123 1187 IPR009081 -
Pvu11g0582 1595 Gene3D Hexapeptide repeat proteins 1194 1321 - -
Pvu11g0582 1595 Gene3D - 23 446 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0582 Pvu-Chr11 4867422 4873232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0582 645 991 Monolignol Biosynthesis Gene Families AT1G20480 24.725 2.30e-19 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0582 - - pvu:PHAVU_011G056700g 3179.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1549 5 37752211 37759876 Pvu11g0582 11 4867422 4873232 PCT