Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0558 ATGGGGCACAGTTCCAAGAAGAAGAAGCGCGGTGGCGGGAGCGGTCGCCGGAGCAAGGGGAGAACGCAGTCCAAAGAACACGCTTCTCAATTTGGCGCCGAGGATTACGACCAGCTCTCCGAAGAGATGACTGCATTATGTGCTATATTCCAAGAAGACTGCAAGATTCTTCCAGGATCGCCTCCTCGTATAGTTATTAAGCTCAGGCCTTACTCAAAGGACATGGGTTATGAGGACCTAGATGTTTCTGCTGCTCTTGTTGTCAGGTGCTTGCCTGGGTATCCTTTCAAGTGCCCCAAGTTGCAGATTATACCGGAGAAAGGGCTATCAGAAGCTGATGCTGATAAGCTTTTGTCTCTCCTCCATGATCAGGCTACTTTAAATGCTAGGGAAGGACGAGTAATGATCTATAATTTGGTTGAGGCTGCTCAAGAATTTCTTTCTGGTATTGAGCCAATTGCCATATCAAATGATTCTAAGCTTCTACACTCAACTATGGAAAGCAATGAAGAATTGTTTACCAAGGATAAGACATCTTTAAGTAAGAAAGGTTCTTTTGTTTATGGTTTTATAGATCTTTTCAGTGGCTATGGAGAAACATGGAGTTGGGGTTTTGGAATGGATGAAACTGCCGGAAAAAGTTCTTCTCTTCCCTCGTCTAAGTTAGATGCCTCAAAACAACTCTTTGAGGCTCGTGATAAGAAATCTAATAGCAAGGAAACACTGTTAGTTATGCAAGAACTTCCTGCCAAATTAGATACTGTCGGGGAAGTTATTGAAGACAGCAAGAATAGTTTATCTTTGACTAGTTCAAGTACATCCTCAGCAGATGATTTTGTAGGGAACGACAATGAAGGTGAGAAAGAGTATTTTACTGTTGATGAGTATGCAATTGAAGATAATGAAGGTATTAATGAAAGTGAGTCTTCAGAGGCTGTGCCTTCTGACTCATCACCTCATCTTCAGCCATCTCAAACAGTTGAAAAGGATATAATGATGGTTCACATGCTTCGCCTTGTTTGTGCTTCTAAAGGATCATTGGCTGACTGTTTGCCACAAGTGGTATCAGAGTTGTACAATTTAGGGGTCATTTCTGATTTAGCACGTGATATGGCATCTAAACCACCTTCCATTTTCAACAAAACCTTTGATCGTGTTTTCCAGAAACACCTGGCTTCATCCAGAATATCTCAATTTTGGAAGCCTGATCTTGGAGGCTCAAAAACAGTTCCCCACAGTTCTCGATATTTGAATGATTTTGAGGAGCTGCGTTCTCTTGGTCAAGGTGGTTTTGGTCACGTTGTATTGTGCAAAAATAAACTTGATGGAAGGCAATATGCAGTAAAGAAAATTCGCCTTAAGGACAAAAGCATGCCTGACCGAATATTAAGGGAAGTAGCTACACTTTCTCGTTTACAGCATCAACATGTTGTTCGGTATTATCAGGCATGGTTTGAAACTGGAGTTTCTGATTCTTATGGTGATTCTGCTTGGGGTTCAAAGACTACTGTGAGCTCTTCTTTCAGCTTTATGGCTGCAACTTCCAATGATATCTTTGGGCATGAAAATCAGCTTGAATCAACTTACCTTTATATACAAATGGAATACTGTCCCAGGACTCTTCGCCAGGTGTTTGAATCATATAATCATTTTGACAAAGAACTGGCTTGGCATTTGTTTCGTCAAATAGTGGAAGGCTTGGCACACATACATGGACAAGGAATAATTCACCGTGACTTAACACCAAATAACATATTCTTTGATGCTCGCAATGATATTAAAATTGGTGATTTTGGTCTTGCCAAGTTCTTGAAGTTAGAGCAGCTGGATCAAGATCTGGGCCACCCTGCTGATGCAACTGGAGTTTCCATTGATGGCACTGGACAAGTGGGGACATATTTCTATACAGCTCCTGAAATTGAGCAAGGATGGCCCAAGATTGATGAAAAGGCTGATATGTACAGCTTAGGAGTGGTTTTCTTTGAGCTTTGGCACCCATTTGGGACAGCAATGGAGAGACATGTTGTTTTATCTGATTTGAAACAGAAAGGGGAAGTTCCACCAATTTGGGTTGCTGAGTTTCCAGAACAGGAATCCTTACTGAGGCAGTTAATGTCTCTGGCTCCTTCTGATCGCCCTTCTGCCACAGAACTTCTGCAAAATGCATTCCCGCAGCGAATGGAGTCTGAATTATTAGATGATATCCTGAGAACAATGCAGAAATCAGAAGATACAAGCATATATGATAAAGTTTTAAGTGCTATCTTTGACGAAGAAATGCTAAGCACAAAACACATTCGTCAGGTTGGTAGATTGGGGTCAGTTGGAGACAGCAGTTCACCCATTCAGTACACAGAATTTGAAACAGAGGTTCGGGATTATGTTGTAGATACAAACAGGGAAATTTTCAGACAGCATTGTGCAAAGCACCTAGAAATATCAACAGTGAGATTATTGGAAGATTGTCCACAGTTTAATAGAAATGCAGTTAAACTTCTGACACATGGAGGAGACATGCTTGAACTTTGCCACGAGTTGCGTTTTCCTTTTGTGAACTGGATTATATCTAACCAGAAATCTTCATTCAAACGATATGAGATATCATGTGTCTTTAGAAGAGCAGTTGGACATTCACCACCAAATCGCTACCTTCAGGGAGATTTTGACATTATTGGTGGCACCTCGGCATTGACAGAAGCAGAGGTCATAAAGGTCACAAGGGACGTAGTCACCTGTTTTTTTCATGCAGATTTATGTGACATTCATCTCAACCATGGTGACCTTCTGGATGCAATTTGGTCATGGATTGGAGTCAAGGTAGAACACAGACTCAAAGTAGCAGAGCTTCTTTCAATGATGGGTTCTTTGCGCCCACAATCCTCAGAAAGGAAATCAAAATGGGTTGTGATAAGGCGGCAGCTTTTGCAGGAACTGAATTTAGCAGAGGCTATGGTAAATAGGTTACAGACTGTAGGTTTAAGGTTTTGTGGATCTGCAGATCATGCACTCCCTCGATTAAGAGGAGCTCTTCCATCTGATAAACGTACACTCAAGGCACTTGATGAGTTGTCTGAGCTTGTCAGTCTCCTGAGGATTTGGAGGATTGACAAAAATATATATATAGATGCATTAATGCCACCAACTGAAAGTTATCATAGAGATTTGTTTTTTCAGGTATACTTAAGGAAGGAGAACGGTCCTGGATCTCTCTCTGAAGGTGCCTTGCTGGCTGTTGGTGGTCGATATGACTACTTGCTTCATCAGCTGTGGAGAAGTGACTGTAAAGGAAATCCTCCCACTGGAGTGGGGACTAGTCTTGCACTGGAGACAATAATTCAGAATTGTCCTGTAGATATCAAGCCCAATAGAAACGAAGTCAGCACCAATATTCTTGTCTGTTCTAGAGGTGGAGGTGGTCTCCTGGTGGAGCGCATGGAGCTAGTTGCGGAATTATGGGAGGAGAACCTTAAGGCTGAATTCGTTCCTACCCCTGATCCAAGTCTTACAGAGCAGTATGAGTATGCTAATGAACATGGTATCAAATGCCTTGTCATCATTGCAGATACAGATTTTTCCTTGACAGATTCTGTTAAGGTTCCTGTTAGGACAGAAAATAAGAATAAGGAAATGACAGGGAAGGTGTATCATAGGAGAAATAATAGGAACCGTGAAGGGAGCGGTTAG 3684 0.418 MGHSSKKKKRGGGSGRRSKGRTQSKEHASQFGAEDYDQLSEEMTALCAIFQEDCKILPGSPPRIVIKLRPYSKDMGYEDLDVSAALVVRCLPGYPFKCPKLQIIPEKGLSEADADKLLSLLHDQATLNAREGRVMIYNLVEAAQEFLSGIEPIAISNDSKLLHSTMESNEELFTKDKTSLSKKGSFVYGFIDLFSGYGETWSWGFGMDETAGKSSSLPSSKLDASKQLFEARDKKSNSKETLLVMQELPAKLDTVGEVIEDSKNSLSLTSSSTSSADDFVGNDNEGEKEYFTVDEYAIEDNEGINESESSEAVPSDSSPHLQPSQTVEKDIMMVHMLRLVCASKGSLADCLPQVVSELYNLGVISDLARDMASKPPSIFNKTFDRVFQKHLASSRISQFWKPDLGGSKTVPHSSRYLNDFEELRSLGQGGFGHVVLCKNKLDGRQYAVKKIRLKDKSMPDRILREVATLSRLQHQHVVRYYQAWFETGVSDSYGDSAWGSKTTVSSSFSFMAATSNDIFGHENQLESTYLYIQMEYCPRTLRQVFESYNHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDLGHPADATGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHVVLSDLKQKGEVPPIWVAEFPEQESLLRQLMSLAPSDRPSATELLQNAFPQRMESELLDDILRTMQKSEDTSIYDKVLSAIFDEEMLSTKHIRQVGRLGSVGDSSSPIQYTEFETEVRDYVVDTNREIFRQHCAKHLEISTVRLLEDCPQFNRNAVKLLTHGGDMLELCHELRFPFVNWIISNQKSSFKRYEISCVFRRAVGHSPPNRYLQGDFDIIGGTSALTEAEVIKVTRDVVTCFFHADLCDIHLNHGDLLDAIWSWIGVKVEHRLKVAELLSMMGSLRPQSSERKSKWVVIRRQLLQELNLAEAMVNRLQTVGLRFCGSADHALPRLRGALPSDKRTLKALDELSELVSLLRIWRIDKNIYIDALMPPTESYHRDLFFQVYLRKENGPGSLSEGALLAVGGRYDYLLHQLWRSDCKGNPPTGVGTSLALETIIQNCPVDIKPNRNEVSTNILVCSRGGGGLLVERMELVAELWEENLKAEFVPTPDPSLTEQYEYANEHGIKCLVIIADTDFSLTDSVKVPVRTENKNKEMTGKVYHRRNNRNREGSG* 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0558 1227 ProSiteProfiles RWD domain profile. 41 150 IPR006575 GO:0005515
Pvu11g0558 1227 Gene3D Ubiquitin Conjugating Enzyme 29 153 IPR016135 -
Pvu11g0558 1227 MobiDBLite consensus disorder prediction 263 284 - -
Pvu11g0558 1227 Pfam Protein kinase domain 420 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0558 1227 ProSitePatterns Tyrosine protein kinases specific active-site signature. 575 587 IPR008266 GO:0004672|GO:0006468
Pvu11g0558 1227 ProSitePatterns Protein kinases ATP-binding region signature. 426 450 IPR017441 GO:0005524
Pvu11g0558 1227 SUPERFAMILY Protein kinase-like (PK-like) 416 747 IPR011009 -
Pvu11g0558 1227 MobiDBLite consensus disorder prediction 303 323 - -
Pvu11g0558 1227 MobiDBLite consensus disorder prediction 263 280 - -
Pvu11g0558 1227 CDD STKc_EIF2AK4_GCN2_rpt2 413 720 - -
Pvu11g0558 1227 Gene3D Phosphorylase Kinase; domain 1 408 536 - -
Pvu11g0558 1227 Gene3D Transferase(Phosphotransferase) domain 1 539 733 - -
Pvu11g0558 1227 SMART RWD2001b 41 150 IPR006575 GO:0005515
Pvu11g0558 1227 SUPERFAMILY UBC-like 36 147 IPR016135 -
Pvu11g0558 1227 PANTHER HISTIDYL-TRNA SYNTHETASE 20 1199 - -
Pvu11g0558 1227 Gene3D - 1125 1214 IPR036621 -
Pvu11g0558 1227 Coils Coil 971 991 - -
Pvu11g0558 1227 MobiDBLite consensus disorder prediction 1 33 - -
Pvu11g0558 1227 ProSiteProfiles Protein kinase domain profile. 420 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0558 1227 Gene3D Bira Bifunctional Protein; Domain 2 783 1119 IPR045864 -
Pvu11g0558 1227 SUPERFAMILY Class II aaRS and biotin synthetases 786 1113 IPR045864 -
Pvu11g0558 1227 MobiDBLite consensus disorder prediction 1 16 - -
Pvu11g0558 1227 PANTHER EIF-2-ALPHA KINASE GCN2 20 1199 - -
Pvu11g0558 1227 Pfam RWD domain 38 147 IPR006575 GO:0005515
Pvu11g0558 1227 Pfam Histidyl-tRNA synthetase 871 1111 IPR041715 -
Pvu11g0558 1227 MobiDBLite consensus disorder prediction 307 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0558 Pvu-Chr11 4615095 4633278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0558 420 723 MAP Kinase Kinase Kinase AT1G63700 25.321 3.93e-22 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Pvu11g0558 Pkinase 7.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0558 K16196 - gmx:100797996 2123.21