Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0557 ATGTTTTGGTTTCTTTGTATTATGGGGATCTCACCAAAATATCAATTATTGAATGTGAATCCATGTTCAGTTAGGCTTATATTTGAGCTGGTGGTTTTATCATACTTGTGGTTACAAGTTACAAGCCTTGGTTCCATGTCATCCATTGCCATCTCATACGGCGAAAAGGGTTCTGTGTTTTGTGGTTTGAAATCTGATGGCTCTCACACAGTGACATGTTATGGATCCAACTCAGCCATAATCTATGGAACACCAACTCGTTTCTCATTTCTTGGTCTAACAGGTGGAGATGGCTTTGTCTGTGGGCTTCTAATGGGTTCCAATCAACCGTACTGCTGGGGTAGCAGTGCCTACATTGAAATGGGAGTGCCTCAACCTATCATCAATGGAGCACAGTACCTAGAAATCAGTGCTGGTGATTACCATGTTTGTGGCTTGAGGAAACCTTTGGTTGGAAAACACAGGTACAGTTCCTTGGTTGATTGCTGGGGCTACAACATGACCAAAAACTATGTGTTTGGGGGACAGATTGAATCAATCACTGCTGGTTCTGAATTCAATTGTGGTCTTTTTTCTCAGAACAGAACTGTGTTCTGCTGGGGTGATGAGACTAATAGCCTAGTGATTAGTTTGATTCCACAAGACACGAGATTCCAGAAAATTTCAGCTGGTGGGTATCATGTGTGTGGAATCTCAGAGGGAGTGAATTCCAGGACTGTTTGTTGGGGGAGAAGCTTGAACCTTGGGGAAGAAATTTCAGTGGCACATGCAGGCCAAGGAAACGTTGATTTGGCACCAAATGATCCTATGCTTTCTGTAGTGGGAGGGAAGTTCCATGCATGTGGCATTAAGAGCTATGATCGTGAAGTGATTTGTTGGGGCTTTATCATCAAACGAAGCACTCCATCTCCTAGAGGGATTAAGGTTTTTGAAGTTGCAGCCGGTGATTACTTTACTTGTGCAGTTCTTGCTGAGAAATCTCTTATGCCTTCATGTTGGGGAGTTGATTTTCCCACCTCACTTCCTTTAGCTGTTTCACCAGGGATTTGTCAACCTGCTCCATGCCCTCCTGGTTCCTATGCCATTGATCAGCATAAAGGTCTCTGCAAATCACCAGATTCTCGTGTTTGCATGCGATGCAGTGGTGGTTGTCCTCCTGAAATGTATCAGAAGAGTGCATGCAATTTGGCTTCTGATAGACTATGTGAATATAACTGTGCCTCTTGTTCTTTATCCGAATGCTTCTTGAACTGCTCGTCTTCAGATTCCTCTGCTTCCTCTCGGAAGAAAACTGAAAATTTTTGGGCTTTACAGTTGCCAGTTGTCATTGCTGAGATTGCTTTTGCAGTTTTCATAGTTAGTGTGGTGTCAATAACTGCAATTTTATACGTCCGCTACAGGCTAAGAGATTGTGAGTGTTCAAAAGGGTCAAAGGGAAAGAAACTCAAGGGGAGTTCTTCCCTGCAAAACGAGAATAAGGTGAGGCCAGAGTTTGAAGAGTTCAAGATCAGAAGGGCTCAAATGTTCACCTATGAGGAACTAGAAAGTGCAACTTGTAGATTCAAGGAAGAGTCCATAGTGGGGAAGGGGAGTTTCTCGTGTGTGTTCAAGGGAGTGTTGAAAGATGGGACAGTTGTTGCTGTCAAAAGGGCAATAGTGTCTCCCAACATGCAGAAGAATTCCAAGGAGTTTCACACTGAACTTGACTTGCTCTCAAGGTTGAACCACGCTCATTTGCTGAACCTTCTAGGCTATTGCGAAGAAGGTGGAGAGAGACTTCTTGTGTATGAGTTCATGGCTCATGGCTCTTTGCACCAACACTTGCATGGAACAAACCAAGTGTTGAGAGAAGAGTTAAATTGGATAAGAAGGGTGACTATTGCAGTACAAGCAGCACGGGGAATTGAATATCTGCATGGATACGCTTGCCCTCCTGTGATTCACAGAGACATCAAGTCCTCAAACATTCTCATCGATGAAGAACACAATGCAAGAGTGGCTGATTTTGGTTTATCATTGTTAGGCCCTGCAGATAGTGGTTCACCACTGGCTGAACTCCCAGCTGGGACTCTCGGCTATCTTGATCCTGAATACTATAGGCTTCATTACCTCACAACCAAATCAGATGTGTACAGTTTTGGTGTTCTTCTTTTGGAGATTCTAAGTGGTAGAAAAGCCATTGACATGCAATATGAAGAAGGGAACATAGTGGAATGGGCAGTGCCTCTTATAAAGTCAGGAGATATAACTGCAATTTTGGACCCGGTTTTGAAACCCCCTCCTGATCTGGAAGCCTTGAAGAGAATAGCCAATGTGGGTTGTAAGTGTGTGAGGATGAGAGGGAAAGAGAGACCCTCAATGGATAAAGTAACAACAGCTTTGGAGAGAGGTCTTGCACAGTTAATGGGAAGTCCATGCATTGAGCAGCCTATTTTGCCCACTGAGGTTGTTTTGGGAAGCAACAGATTGCACAAGAAATCATCTCAAAGATCCTCAAACAGGTCAATTTCTGAGACTGATGTGGTAGAAGCTGAGGATCAAAGGTTTGAGTTCAGGGCACCCTCATGGATTACTTTCCCCAGTGTGACATCTTCTCAAAGGAGAAAGTCATCAGTGTCTGAGGTAGATGTTGATGGAAAGAATAATGCAGCAGAAGGTAAGAACATGGCCAATGTTGGAGGTGATGTTTTGAGAAGCCTTGATGAAGAGATTGGTCCTGCTTCTCCAGGAGAGAGCCTGTTCTTGCAGCACAACTTCTAA 2760 0.438 MFWFLCIMGISPKYQLLNVNPCSVRLIFELVVLSYLWLQVTSLGSMSSIAISYGEKGSVFCGLKSDGSHTVTCYGSNSAIIYGTPTRFSFLGLTGGDGFVCGLLMGSNQPYCWGSSAYIEMGVPQPIINGAQYLEISAGDYHVCGLRKPLVGKHRYSSLVDCWGYNMTKNYVFGGQIESITAGSEFNCGLFSQNRTVFCWGDETNSLVISLIPQDTRFQKISAGGYHVCGISEGVNSRTVCWGRSLNLGEEISVAHAGQGNVDLAPNDPMLSVVGGKFHACGIKSYDREVICWGFIIKRSTPSPRGIKVFEVAAGDYFTCAVLAEKSLMPSCWGVDFPTSLPLAVSPGICQPAPCPPGSYAIDQHKGLCKSPDSRVCMRCSGGCPPEMYQKSACNLASDRLCEYNCASCSLSECFLNCSSSDSSASSRKKTENFWALQLPVVIAEIAFAVFIVSVVSITAILYVRYRLRDCECSKGSKGKKLKGSSSLQNENKVRPEFEEFKIRRAQMFTYEELESATCRFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIVSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGTNQVLREELNWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDITAILDPVLKPPPDLEALKRIANVGCKCVRMRGKERPSMDKVTTALERGLAQLMGSPCIEQPILPTEVVLGSNRLHKKSSQRSSNRSISETDVVEAEDQRFEFRAPSWITFPSVTSSQRRKSSVSEVDVDGKNNAAEGKNMANVGGDVLRSLDEEIGPASPGESLFLQHNF* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0557 919 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 23 919 - -
Pvu11g0557 919 Pfam Protein tyrosine and serine/threonine kinase 524 793 IPR001245 GO:0004672|GO:0006468
Pvu11g0557 919 PANTHER RECEPTOR-LIKE KINASE 23 919 - -
Pvu11g0557 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Pvu11g0557 919 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 354 402 IPR001368 GO:0005515
Pvu11g0557 919 SMART serkin_6 521 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0557 919 Gene3D - 89 340 IPR009091 -
Pvu11g0557 919 MobiDBLite consensus disorder prediction 867 889 - -
Pvu11g0557 919 ProSiteProfiles Protein kinase domain profile. 521 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0557 919 SUPERFAMILY Protein kinase-like (PK-like) 501 794 IPR011009 -
Pvu11g0557 919 Gene3D Phosphorylase Kinase; domain 1 491 598 - -
Pvu11g0557 919 Gene3D Transferase(Phosphotransferase) domain 1 599 802 - -
Pvu11g0557 919 SUPERFAMILY RCC1/BLIP-II 40 295 IPR009091 -
Pvu11g0557 919 MobiDBLite consensus disorder prediction 822 841 - -
Pvu11g0557 919 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Pvu11g0557 919 MobiDBLite consensus disorder prediction 822 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0557 Pvu-Chr11 4602210 4605788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0557 26 919 Receptor kinase-like Gene Family AT3G59420 68.036 0.0 1239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pvu11g0557 PK_Tyr_Ser-Thr 2.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0557 - - gmx:100797455 1686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0557 11 4602210 4605788 Pvu5g1578 5 38001220 38004640 PCT