LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu11g0508	ATGGCTTCTTCAGACACCAACGGCACCAAGCTTCCCCTCAAGCAGATCCCTGGAAGCTATGGCATCCCCTTCTTCGGACCCATGAGTGACAGACACGACTACTTCTACCACCAGGGACGCGACAAGTTCTTCGCCACGCGAATCCAGAAGTACAAATCGACCGTTATCAGAACCAACATGCCACCGGGTCCCTTCATTTCCTCAAACCCTAGAGTCATTGCTCTTCTCGACGCCGTCTCCTTCCCAATCCTCTTCGACAACTCCAAGGTCGACAAGCGCGACGTTCTCGACGGCACCTTCATGCCGTCCACCTCCTTCTTCGGCGGCTACCGCGTCTGCGCCTTCCAGGACACCACCGAGCCCTCCCACGCGCTCATCAAGACCTTCTACCTCAACCTCCTCGCCTCCAAGCACGCCTCCTTCATCCCGCTCTTCCGCAACAACCTCGCCGAACACTTCGCCGACCTCGAGGACAAGCTCGCCGGAAAATCCTCCAAGGTCAGCTTCAACACCTCCGTCGGCTCCGCCTCCTTCAACTTCCTCTTCCGCCTCCTCACCGGTCAAGATCCCACCTCAACCGTAATCGGCAGCGACGGCCCCAGCCTAGTCACGACCTGGCTCGCAGCGCAGCTCGCTCCACTCGCCACTCTAGGTCTACCCTGGATTTTCAACTACGTAGAAGATATCCTGATCAGAACACTCCCCTTCCCTGCGTGGACTGTGAAATCCAGCTACAAGAAACTCTACAACGGTTTTGCCAGCGCAGGTTCGTCGGTGCTGGATGAAGCGGAGCGGTTGGGGATTAAGAGAGACGAAGCGTGCCACAACCTGGTGTTCACGTTAGGGTTCAACGCCCAAGGAGGCTTCGTGAACCAGTTTCCGATTCTGATGAAATGGGTCGGGTTGGGCGGGGAAGGTTTGCACAAACAGCTTGCGGAGGAAATCAGGAGCGTTGTTAAGGAAGAAAACGGGGTGAGTCTCCAAGCGTTGGATCGGATGACTTTGACTAAATCTGTGGTGTACGAGGCGATGAGGATAGAGCCTGCTGTGCCGTTCCAGTACGCCAAGGCGAGGAAAGATCTTGTGGTGGAGAGCCACGATGCGGCGTACGAGATCAAGAAGGGCGAGATGATCTTTGGATATCAGCCGTTCGCTACCAAAGATCCTAAGATATTTGAGAAACCGGAGGAGTTTGTTGCCAACAGGTTCGTGGGGCCTGATGGAGAGAAGTTGTTGAATCACGTGCTGTGGTCCAATGCACGCGAGACGGAGGAGCCCACACCGGATAATAAACAGTGCCCGGCCAAGAATCTGGTGGTGCTCCTGTGCAGGCTATACCTGGTGGAATTCTTCCTGCGATACGATACTTTTAGCTTCGACTTTAAACTCGCCGTTTTGGGTCCCGAGATTACCATCAAGTCACTCCTCAAAGCATCCTACTAA	1443	0.5495	MASSDTNGTKLPLKQIPGSYGIPFFGPMSDRHDYFYHQGRDKFFATRIQKYKSTVIRTNMPPGPFISSNPRVIALLDAVSFPILFDNSKVDKRDVLDGTFMPSTSFFGGYRVCAFQDTTEPSHALIKTFYLNLLASKHASFIPLFRNNLAEHFADLEDKLAGKSSKVSFNTSVGSASFNFLFRLLTGQDPTSTVIGSDGPSLVTTWLAAQLAPLATLGLPWIFNYVEDILIRTLPFPAWTVKSSYKKLYNGFASAGSSVLDEAERLGIKRDEACHNLVFTLGFNAQGGFVNQFPILMKWVGLGGEGLHKQLAEEIRSVVKEENGVSLQALDRMTLTKSVVYEAMRIEPAVPFQYAKARKDLVVESHDAAYEIKKGEMIFGYQPFATKDPKIFEKPEEFVANRFVGPDGEKLLNHVLWSNARETEEPTPDNKQCPAKNLVVLLCRLYLVEFFLRYDTFSFDFKLAVLGPEITIKSLLKASY*	481

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu11g0508	480	Pfam	Cytochrome P450	309	408	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu11g0508	480	Gene3D	Cytochrome P450	7	480	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu11g0508	480	PANTHER	FATTY ACID HYDROPEROXIDE LYASE	7	478	-	-
	Pvu11g0508	480	PRINTS	E-class P450 group IV signature	333	349	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu11g0508	480	PRINTS	E-class P450 group IV signature	370	384	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu11g0508	480	PRINTS	E-class P450 group IV signature	386	404	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu11g0508	480	PANTHER	CYTOCHROME P450 26	7	478	-	-
	Pvu11g0508	480	SUPERFAMILY	Cytochrome P450	11	456	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu11g0508	Pvu-Chr11	4247841	4249702	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu11g0508	3	480	Cytochrome P450	AT5G42650	48.852	3.88e-165	474

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu11g0508	K01723		-	gmx:100810890	822.387

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu11g0508	11	4247841	4249702	Pvu11g0508	11	4247841	4249702	ECH