Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0480 ATGACGAGTGAAGCAAAGGTAGTAGAAAGTGAAGAAGCTCATCAAACTCGAAAGAACCTCAAACTCAACAACTACACTTTTGCCTGTGCTATCTTGGCCTCCATCACTTCAATCTTGCTTGGCTATGATATCGGTGTGATGAGTGGAGCAGCCATATACATTAAAAGAGATCTAAAATTGTCGGATGTCAAAATCGAGATCCTCGTCGGAATCTTCAACCTCTACTCTTTGGTAGGGTCGTGCCTCGCCGGAAGAACCTCTGACTGGATTGGTCGTCGGTACACTATTGTTTTTGCCGGCGCCATTTTCTTCGTCGGAGCCATTCTCATGGGCTTTTCTCCCAACTATGCCTTTCTCATGTTCGGCCGTTTTGTTGCCGGCGTCGGCATGGGCTACGCTCTCATGATTGCTCCCGTTTACACAGCCGAACTCTCCCCACCCTCCTCTCGTGGCTTCCTCACTTCCTTCACCGATGTGTTTATCAATGTAGGGATATTACTTGGATACATATCAAACTATGCATTATCAAAGATGACGCTGAAGTTAGGTTGGCGAATGATGCTTGGAATCGGTGCAGTTCCATCGATGTTTTTAACGGTGGGTGTGTTGGCGATGCCTGAATCTCCACGGTGGCTTGTGATGAGGGGCCGTTTGGGAGAGGCAAAGAAAGTGCTCAACAAAACCTCGGACACCAAGGAAGAAGCTCAACAGAGACTAGCGGAGATCAAAGAAGCCGCCGGAATCCCTGAGAACGAAGAAGGCGAGGTGGTTGAGGTGAGCAAGCGAAACAGAGGCGAAGGTGTATGGAAAGAGCTGTTCCTCGATTCAACGCCTGCAATACGTCACATGTTAATGGCTACCCTTGGGATTCACTTCTTTCAGCAAGCATCTGGAGTAGACGCTGTGGTTTTGTACAGCCCCACGATCTTCGAAAAGGCTGGGATTACCAGTGACACATACAAGCTTCTTGCAACAGTGGGCGTTGGGTTTGTTAAGACCATGTTCATCTTGGTTGCTACCTTCATGCTGGACCGTCTAGGGCGTCGTCCATTGCTACTGTCGAGTTTTGGAGGGATGCTGCTCTCGCTTCTCACACTTGCTGTCTCTCTCACTGTGATTCATGAGTCCAAGAAAAAGCCAATATGGGTGATTGGATTGAGCATGGTGATGGTGTTATCGTACGTGGCTTCCTTCTCCATTGGTGCGGGACCCGTGACGTGGGTGTACAGCTCTGAAATATTTCCCTTGAGGTTGCGGGCACAAGGTATGGCTGTGGGAGTGGTGGTGAATAGGACTACGAGTGGGGTTCTCTCCATCACTTTTTTGTCCTTATCTAAAGCGATTACTATTGGTGGGGCTTTCTTTCTTTATTCTGCCATTGCTGCTTTTGGCTGGCTCTTCATTTACACCGTTCTTCCTGAAACACGAGGTAAAACGCTTGAAGAAATGGATACGTCTTTTGGTAAATTTTGGGTCAAATCCACCACAACCAAACCAGTAAACAACAGGCATGCTCAAGTGCCACAACTCCAGCAAGGGACCATTCATGTCCAAACTTAG 1560 0.4808 MTSEAKVVESEEAHQTRKNLKLNNYTFACAILASITSILLGYDIGVMSGAAIYIKRDLKLSDVKIEILVGIFNLYSLVGSCLAGRTSDWIGRRYTIVFAGAIFFVGAILMGFSPNYAFLMFGRFVAGVGMGYALMIAPVYTAELSPPSSRGFLTSFTDVFINVGILLGYISNYALSKMTLKLGWRMMLGIGAVPSMFLTVGVLAMPESPRWLVMRGRLGEAKKVLNKTSDTKEEAQQRLAEIKEAAGIPENEEGEVVEVSKRNRGEGVWKELFLDSTPAIRHMLMATLGIHFFQQASGVDAVVLYSPTIFEKAGITSDTYKLLATVGVGFVKTMFILVATFMLDRLGRRPLLLSSFGGMLLSLLTLAVSLTVIHESKKKPIWVIGLSMVMVLSYVASFSIGAGPVTWVYSSEIFPLRLRAQGMAVGVVVNRTTSGVLSITFLSLSKAITIGGAFFLYSAIAAFGWLFIYTVLPETRGKTLEEMDTSFGKFWVKSTTTKPVNNRHAQVPQLQQGTIHVQT* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0480 519 ProSitePatterns Sugar transport proteins signature 2. 125 150 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu11g0480 519 ProSitePatterns Sugar transport proteins signature 1. 83 100 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu11g0480 519 PANTHER SUGAR TRANSPORTER 16 508 - -
Pvu11g0480 519 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0480 519 PRINTS Sugar transporter signature 120 139 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0480 519 PRINTS Sugar transporter signature 294 304 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0480 519 PRINTS Sugar transporter signature 388 409 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0480 519 PRINTS Sugar transporter signature 411 423 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0480 519 CDD MFS_PLT 32 483 IPR044776 GO:0005351
Pvu11g0480 519 Pfam Sugar (and other) transporter 29 487 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu11g0480 519 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 476 IPR020846 GO:0022857
Pvu11g0480 519 SUPERFAMILY MFS general substrate transporter 12 484 IPR036259 -
Pvu11g0480 519 Gene3D MFS general substrate transporter like domains 18 489 IPR036259 -
Pvu11g0480 519 TIGRFAM SP: MFS transporter, sugar porter (SP) family 4 483 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0480 519 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 16 508 IPR045262 GO:0015144
Pvu11g0480 519 Coils Coil 218 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0480 Pvu-Chr11 4064452 4066197 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0480 3 511 Organic Solute Cotransporters AT3G18830 65.882 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0480 - - gmx:547958 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0480 11 4064452 4066197 Pvu5g1608 5 38220036 38222927 PCT