Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0468 ATGACGGAGGCCAACACAACCACGAGTGTCAGTTTGAAGCTTCTCGTCTTGGTGGCTGTTTTGGTCGTCTTCGCGGTGGTGATTGTGGTTCTCGTCTTCTTCCTGTGCTTGCGCGGGAGCCGGAGCTGGAAGCGGCGGAAGCTGGCGGCGAAACACAGCTCCGGGAGCATCCCTCTGGTGTCGAAGGAGATCATGGTGGTGAGGACCTCGGATCTCACCCCTGCGACCACGAGCGAGATTGGTGACGTGGAGGGTGATCCGAAGAAGGAGGCGGGGATGAAGGTGGAGATTGGCGCGGTGACGGCAGTGATGAAGAGCGAAGTTTCCGGTGGTGGGGCCCACCGCAGCGAGGTGTCGGTGGAGGATCCGAACATAGGGTGGGGCCGGTGGTACAGCATGAAGGAAGTGGAACTCGCCACGCGCGGTTTCGCAGAAGGGAATGTTATTGGAGAAGGTGGGTACGGCGTTGTGTACAGAGGAATTATGCACGATGCTTCCGTCGTTGCTGTTAAGAATCTTCTCAACAACAAGGGTCAAGCAGAGAAGGAGTTTAAGGTAGAGGTTGAAGCTATTGGAAAAGTAAGGCATAAGAATTTGGTTCGTTTGGTAGGATATTGCGCAGAAGGTGCTCGAAGGATGCTTGTTTATGAGTATGTTGACAACGGAAACTTGGAACAGTGGCTGCATGGTGATGTAGGACCAGTTAGCCCCTTGACATGGGAGATTCGAATGAGAATTGCTACTGGGACAGCAAAAGGGCTAGCCTATTTGCATGAAGGCTTAGAACCCAAAGTTGTGCACCGGGATGTAAAATCCAGTAACATTCTCTTGGATAAAAATTGGAATGCCAAAGTCTCAGATTTTGGACTTGCCAAACTCTTAGGATCTGAGAAAACCCATGTGACTACGCGTGTGATGGGAACATTCGGATATGTTGCACCTGAGTATGCAAGCTCAGGTATGCTTAATGAGCGCAGTGATGTGTATAGCTTTGGAGTTCTACTCATGGAGATAATCACAGGAAGAAGCCCCATTGATTATTCAAAACCACCTGGAGAGATGAATTTAGTAGATTGGTTCAAGACAATGGTAGCAAGTCGTCGCAGTGAGGAGCTAGTTGATCCTTTGATTGAGATTCCACCCTCTCCAAGATCTTTGAAACGAGTTTTACTTATTTGTCTGCGGTGTATAGACTTGGATGTGGTTAAGCGACCAAAGATGGGTCAAATTGTTCATATGCTCGAAACAGATGATTTCCCCTTTCGTTCTGAGCTACGCACAGTGAGAGACAAAGATCCTTTGCCTTCTCATGCAGATGTTTCCATTAAAGTTCCTTATCCACCACCAAAGCATGCAGAAATCATAGAAAAATCAAGATGGAGATGA 1386 0.4863 MTEANTTTSVSLKLLVLVAVLVVFAVVIVVLVFFLCLRGSRSWKRRKLAAKHSSGSIPLVSKEIMVVRTSDLTPATTSEIGDVEGDPKKEAGMKVEIGAVTAVMKSEVSGGGAHRSEVSVEDPNIGWGRWYSMKEVELATRGFAEGNVIGEGGYGVVYRGIMHDASVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVRLVGYCAEGARRMLVYEYVDNGNLEQWLHGDVGPVSPLTWEIRMRIATGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKNWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVAPEYASSGMLNERSDVYSFGVLLMEIITGRSPIDYSKPPGEMNLVDWFKTMVASRRSEELVDPLIEIPPSPRSLKRVLLICLRCIDLDVVKRPKMGQIVHMLETDDFPFRSELRTVRDKDPLPSHADVSIKVPYPPPKHAEIIEKSRWR* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0468 461 SMART serkin_6 143 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0468 461 Gene3D Phosphorylase Kinase; domain 1 113 218 - -
Pvu11g0468 461 SUPERFAMILY Protein kinase-like (PK-like) 121 416 IPR011009 -
Pvu11g0468 461 Pfam Protein kinase domain 145 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0468 461 PANTHER OS01G0323000 PROTEIN 5 461 - -
Pvu11g0468 461 ProSitePatterns Protein kinases ATP-binding region signature. 149 171 IPR017441 GO:0005524
Pvu11g0468 461 CDD STKc_IRAK 149 415 - -
Pvu11g0468 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Pvu11g0468 461 PANTHER RECEPTOR-LIKE KINASE 5 461 - -
Pvu11g0468 461 ProSiteProfiles Protein kinase domain profile. 143 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0468 461 Gene3D Transferase(Phosphotransferase) domain 1 219 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0468 Pvu-Chr11 3918004 3921768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0468 4 417 Trihelix Transcription Factor Family AT1G70460 41.289 3.22e-95 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pvu11g0468 Pkinase 9.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0468 - - gmx:100305442 766.148