Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0463 ATGTTTAGTTCCTCTGTTCCACTGCACAAACCAATAACAACATGCACCATTTTCAATTGCCAAAACCCAAACCAGCATCACTCCATTCTCCGCAAGCACAATTCCAAATCCACCGCGTATCTCCTTCAGCATCTCGCCCTCAAGGATGGAGTACCCGTTCCCACTTCCATTCCCAAACCCAGCGAGCTTCTAGACCCAATGCCCCACGATGAGAAAGTGAAGGTTTTGGAGCTTTCCCTCGTCAGGAAAAGGACCCCTCAGTTTCCGGGTTCCATCTACGCTCAGTCTCCCAGCGACTCCGATGTGGGTTCTTCTCTGCCCCCTATCCGTACCCTCTTCCAATCAGGTACTAACCCTGATGAGAAGGAAGAGGAGGAGAAGGAGATGATAATGCGCGCTCTCGAGATTCGCAGAAAGGTCACTGAAGAGGTTTTCAAAGAAGCCATGCGAAAGGGAAAGTTTGGAATTACCTACTCTACCAATTTGATTGGCAGGTTATCCGGCTTTCTGGATCACATCATGATTGAAGCTGCTAACTTGAAAAGATTGCCCGAATTTTCAAACTCCACCTTCAATTTACGCGCCAAAACTGTCATTGATGACTCTAAAGTTGTGCCACTTATTAGATGGTTGAAGCATAATGCACTGTCGTATCCTCGGATAGCGAAGATCATTTTGATGTCAAGAGGAAAACCTGAGGCCATAAGAAGTTTTGTCATGTGGTTGAAATCGGTACGTGTGAAAGGTGAGTTTCTCGGTGTTGTAATGTTGAAGGCTGGAGAGAATATTTTGCAGCGCAGACATGAGGAGCTGGATGAGATTGTTCAGTATTTGGAGGCAAATGGAGTAAGGAGGGATTGGATGGGTTATGTCATTAGTCGTTGTCCTCAGTTATTGTCTTACAGCTTAGAAGAAGTGAAGACTCGTGCACATTTCTTCATAGATATGGGTTTAAATGAGAAAGATTTTGGTACAATGGTTTTCGATTTTCCTAGAGTTCTTGGTTACTATTCTCTGGAAGAAATGAATGAAAAGGTTAATTACTTAAAAGAATTTGGGCTTCAAATTGAGGATGTTGGCAAATTGCTTGCATTTAGGCCACAATTGATGGCGTGCAGCATTGAAGAACACTGGAAGCCTCTTGTAAAGTATCTGTATTATTATGGGATCACTCGAAATGGCATGAAGAGAATGCTTGTCATTAAACCAATGGTCTTTTGTGCTGACTTGGAGAAGACTATTGTGCCAAAGGTACAATTTTTTGAAGATATAGGGGTTCGCAAGGATGGGATTGGCAGCATGCTTGTGAAGTTTCCACCTCTACTCACTTACAGCCTGGAGAAGAAAATTAAACCAGTGGTCATATTCTTGATGACCAAAGCTGGAGTCACTGAGAAAGATATTGGCAAGGTTGTGGCTCTTGGACCTGAGCTCTTGGGATGCAATATAGTACATAAGCTTTATGTAAATGTAAAATATTTTTTATCTCTTGGCATACGTCTTCGGCAATTGGGTGAGATGATTACTGATTTCCCATTGCTGCTCAGATACAATCCAGATGTCCTTCGTCCAAAGTATATTTATTTGCGAAAGTCCATGGTCCGGCCTTTGAAAGATGTCATTGAGTTTCCAAGGTTTTTCAGCTATTCTCTTGAGGGTCGAATTATCCCAAGGCACAAGGTTCTAGTGGAGAACCATATTAATATTAAGCTGAGATACATGTTGGCTAACAGTGACGAAGAATTCCACAAAATGGTCAAGGATTTAATTGGAAAGCGCAAAAGATTTGAATCTGCTGTCACAAATGAGGGCACTACCCATCTCCAATCTGTTGTTACTGAAGATATTTCAACACCCCTAGCATAA 1866 0.4244 MFSSSVPLHKPITTCTIFNCQNPNQHHSILRKHNSKSTAYLLQHLALKDGVPVPTSIPKPSELLDPMPHDEKVKVLELSLVRKRTPQFPGSIYAQSPSDSDVGSSLPPIRTLFQSGTNPDEKEEEEKEMIMRALEIRRKVTEEVFKEAMRKGKFGITYSTNLIGRLSGFLDHIMIEAANLKRLPEFSNSTFNLRAKTVIDDSKVVPLIRWLKHNALSYPRIAKIILMSRGKPEAIRSFVMWLKSVRVKGEFLGVVMLKAGENILQRRHEELDEIVQYLEANGVRRDWMGYVISRCPQLLSYSLEEVKTRAHFFIDMGLNEKDFGTMVFDFPRVLGYYSLEEMNEKVNYLKEFGLQIEDVGKLLAFRPQLMACSIEEHWKPLVKYLYYYGITRNGMKRMLVIKPMVFCADLEKTIVPKVQFFEDIGVRKDGIGSMLVKFPPLLTYSLEKKIKPVVIFLMTKAGVTEKDIGKVVALGPELLGCNIVHKLYVNVKYFLSLGIRLRQLGEMITDFPLLLRYNPDVLRPKYIYLRKSMVRPLKDVIEFPRFFSYSLEGRIIPRHKVLVENHINIKLRYMLANSDEEFHKMVKDLIGKRKRFESAVTNEGTTHLQSVVTEDISTPLA* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0463 621 Pfam mTERF 220 351 IPR003690 GO:0003690|GO:0006355
Pvu11g0463 621 Pfam mTERF 348 582 IPR003690 GO:0003690|GO:0006355
Pvu11g0463 621 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 54 606 - -
Pvu11g0463 621 SMART mt_12 324 355 IPR003690 GO:0003690|GO:0006355
Pvu11g0463 621 SMART mt_12 505 536 IPR003690 GO:0003690|GO:0006355
Pvu11g0463 621 SMART mt_12 432 464 IPR003690 GO:0003690|GO:0006355
Pvu11g0463 621 SMART mt_12 469 500 IPR003690 GO:0003690|GO:0006355
Pvu11g0463 621 SMART mt_12 537 568 IPR003690 GO:0003690|GO:0006355
Pvu11g0463 621 SMART mt_12 396 427 IPR003690 GO:0003690|GO:0006355
Pvu11g0463 621 SMART mt_12 289 319 IPR003690 GO:0003690|GO:0006355
Pvu11g0463 621 SMART mt_12 360 391 IPR003690 GO:0003690|GO:0006355
Pvu11g0463 621 Gene3D Transcription termination factor 3, mitochondrial 364 589 IPR038538 -
Pvu11g0463 621 PANTHER CGI-12 PROTEIN-RELATED 54 606 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0463 Pvu-Chr11 3888297 3892149 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pvu11g0463 mTERF 1e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0463 K15032 - zju:107426883 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0463 11 3888297 3892149 Pvu11g0463 11 3888297 3892149 ECH