Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0438 ATGGCTTCCTCAAGTGGAACATGTTCAGGGTCATCCTCTCTGCTTCAGAACTCTGGCTCCGAGGAGGATTTGCGAGCGGTGATGGATCAGAGAAAGAGGAAGAGAATGATATCGAATCGAGAATCTGCGCGGCGATCTCGCATGAGGAAGCAGAAGCACTTGGACGATCTGGTTACCCAAGTGGCGCAGCTGAGAAAGGAGAATCAGCAGATACTCACCAGTGTCAACATCACTACGCAGCAGTTCTTGAGCGTGGAGGCTGAAAACTCAGTGCTGAGGGCTCAGGTGGGAGAGCTGAGCCACAGGCTGGAGTCTCTGAACGAGATCGTCGAGGTTCTGAATGCAGGTTTCGGCAACACCACCTTCATCGAACCAACCACCAATAACTCCTTCTTCAACCCCATGAACATGGGGTATCTGAACCACCCCATCATGGCTTCTGCAGATATATTGCAGTACTGA 462 0.5152 MASSSGTCSGSSSLLQNSGSEEDLRAVMDQRKRKRMISNRESARRSRMRKQKHLDDLVTQVAQLRKENQQILTSVNITTQQFLSVEAENSVLRAQVGELSHRLESLNEIVEVLNAGFGNTTFIEPTTNNSFFNPMNMGYLNHPIMASADILQY* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0438 153 MobiDBLite consensus disorder prediction 1 20 - -
Pvu11g0438 153 MobiDBLite consensus disorder prediction 1 52 - -
Pvu11g0438 153 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Pvu11g0438 153 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 151 - -
Pvu11g0438 153 MobiDBLite consensus disorder prediction 24 52 - -
Pvu11g0438 153 Coils Coil 47 74 - -
Pvu11g0438 153 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Pvu11g0438 153 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Pvu11g0438 153 Gene3D - 29 84 - -
Pvu11g0438 153 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Pvu11g0438 153 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Pvu11g0438 153 PANTHER BZIP TRANSCRIPTION FACTOR 1 151 - -
Pvu11g0438 153 Pfam bZIP transcription factor 31 74 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0438 Pvu-Chr11 3708499 3710233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0438 26 153 bZIP Transcription Factor Family AT4G34590 56.522 3.16e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu11g0438 bZIP_1 1.3e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0438 K25786 - gmx:100101862 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0438 11 3708499 3710233 Pvu11g0438 11 3708499 3710233 ECH