Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0426 ATGGGTGAGGTAGCGCGTAGTGGATGTTGTCCTCCGATGGATCTGTTCCGTTCGGAGCCGATGCAACTGGTTCAGCTCATCATCCCAATCGAATCTGCTCACCGCACTGTCTCCTACCTCGGCGACCTTGGCCTTCTTCAGTTCAAAGATCTCAATGCAGATAAGAGTCCTTTTCAGCGGACCTATGCAAATCAGATAAAAAGATGTGGAGAGATGGCTCGGAGACTGCGATATTTCAAGGAGCAAATGTTGAAGGCAGGTGTTTCACCAAAATATTCCACAACACCAGTTGATGTGAACATTGATGACCTTGAGGTAAAACTTACAGAAATTGAGTCAGAGTTAACTGAGATGAATGCAAATGGTGAGAAGTTGCAACGATCATATAATGAGCTTGTGGAGTATAAGCTTGTTTTACAGAAGGCTGGTGAGTTTTTCCGCTCAGCTCAAAGTCGTGCCATAGAGCAGCAGAGAGAATATGAATCCCGTCAGCTGGGTGGTGAATCTATGGAAACACCTTTATTACAGGACCAAGAATTGTTAGGTGATTCATCAAAGCAAATTAAGTTGGGGTTTTTGGCAGGTCTTGTTCCCAGGGAAAAGTCTATGGTATTTGAGAGAATTTTATTTCGTGCTACTAGAGGAAATGTATTTTTAAGGCAGGCTACTGTTGAGGACCCTGTCACAGACCCTGTTTCTGGAGATAAGACTGAGAAAAATGTTTTTGTGATCTTCTATGCTGGTGAAAAAGCAAAAGCCAAGATTCTTAAAATATGTGAAGCTTTTGGTGCTAATCGTTACCCTTTTGCTGAGGAACTTGGAAAACAAGCTCAAATGATCACAGAGGTTTCTGGAAGACTTTTAGAATTGAAGACCACTATTGATGCTGGACTACTTCACCGGAATAACTTGCTAAATACTATTGGGGCTCAATTTGAGCAATGGGATGTTCTGGTGAGGAAGGAGAAATCTATTCATCATATCCTGAACATGCTGAGCCTTGATGTGACGAAAAAATGTCTTGTGGCTGAGGGGTGGAGTCCTATCTTTGCAAATAAGCAGATCCAGGATGCATTACAGCGGGCAGCATTGGACTCTAATTCTCAAGTCAATGCCATTTTCCAAGTTCTGCATACCAGGGAGTTGCCGCCTACCTATTTCCGCACAAATAAATTTACTTCTTCTTTTCAAGGAATTATTGATTCATACGGGGTTGCTAAGTATCAGGAGGCAAATCCAACTGTGTATACTGTAGTTACCTTTCCATTTCTTTTTGCTGTTATGTTTGGCGATTGGGGGCATGGAATATGTTTACTACTGGCAGCTCTATATTTCATAATCAGGGAGAAGAAACTTTCTAGTCAGAAGCTTGATGACATCACGGAGATGACTTTTGGAGGTCGTTATGTTATTTTGATGATGGCGTTGTTCTCAATCTACACTGGTTTTATCTATAATGAGTTCTTTTCTGTTCCATTTGCACTCTTTGCCCCCTCTGCGTATGATTGCCGTGACCTTTCTTGCAGGGATTCTACAACAGTGGGCTTGATAAAAGTGCGTGACACTTACCCTTTTGGAGTGGATCCTGTATGGCATGGTACACGAAGTGAACTACCATTTCTGAACTCATTGAAAATGAAAATGTCAATTCTTCTTGGAGTTGCTCAAATGAACCTTGGAATTGTCATGAGCTATTGCAATGCCATATTCTTTAGAAACAGAGTGAATGTGTGGTTCCAGTTCATTCCCCAGATGATATTTCTCAACAGTCTATTTGGCTACCTAGCCCTTCTTATTATTGTCAAGTGGTCTACTGGTTCTCAAGCGGATTTGTACCATATTTTGATCTACATGTTCCTGAGCCCGACTGATGATTTGGGTGAGAACCAACTATTTGTTGGTCAGAGAAATTTGCAGCTTGTGCTTTTGCTTCTGGCTGTTGTCTCTGTCCCCTGGATGCTGGTTCCAAAACCATTTATTTTAAAGAAGCAACATGAAGCTAGGCACGGGGTTGAATCCTATACACCGCTTGAAAGCACAGATGAGAGCCTGCAAGTGGAGTCAAACCACGATTCCCATGGTCATGAGGAATTTGAGTTCAGTGAAGTCTTTGTACATCAACTTATACATACCATAGAATTTGTACTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAGCCTTGCTCATTCAGAGCTATCAAGTGTATTCTACGAGAAGGTTCTGCTGATGGCATGGGGGTACAATAATGTGATTATCCTGATAGTGGGTCTCATTGTTTTCATCTTCGCCACCGTCGGAGTGTTACTTGTCATGGAAACTCTGAGCGCCTTCTTGCATGCGTTACGACTTCACTGGGTGGAGTTTCAGAACAAGTTTTACGAGGGCGATGGTTACAAATTCCACCCTTTCTCGTTCTCCTTACTGGATGATGAAGAATGA 2457 0.4241 MGEVARSGCCPPMDLFRSEPMQLVQLIIPIESAHRTVSYLGDLGLLQFKDLNADKSPFQRTYANQIKRCGEMARRLRYFKEQMLKAGVSPKYSTTPVDVNIDDLEVKLTEIESELTEMNANGEKLQRSYNELVEYKLVLQKAGEFFRSAQSRAIEQQREYESRQLGGESMETPLLQDQELLGDSSKQIKLGFLAGLVPREKSMVFERILFRATRGNVFLRQATVEDPVTDPVSGDKTEKNVFVIFYAGEKAKAKILKICEAFGANRYPFAEELGKQAQMITEVSGRLLELKTTIDAGLLHRNNLLNTIGAQFEQWDVLVRKEKSIHHILNMLSLDVTKKCLVAEGWSPIFANKQIQDALQRAALDSNSQVNAIFQVLHTRELPPTYFRTNKFTSSFQGIIDSYGVAKYQEANPTVYTVVTFPFLFAVMFGDWGHGICLLLAALYFIIREKKLSSQKLDDITEMTFGGRYVILMMALFSIYTGFIYNEFFSVPFALFAPSAYDCRDLSCRDSTTVGLIKVRDTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIVMSYCNAIFFRNRVNVWFQFIPQMIFLNSLFGYLALLIIVKWSTGSQADLYHILIYMFLSPTDDLGENQLFVGQRNLQLVLLLLAVVSVPWMLVPKPFILKKQHEARHGVESYTPLESTDESLQVESNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLMAWGYNNVIILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFSFSLLDDEE* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0426 818 Coils Coil 101 128 - -
Pvu11g0426 818 PIRSF ATP6V0A1 11 818 IPR026028 GO:0000220|GO:0046961
Pvu11g0426 818 PANTHER VACUOLAR PROTON ATPASES 5 818 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pvu11g0426 818 Pfam V-type ATPase 116kDa subunit family 39 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pvu11g0426 818 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 5 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0426 Pvu-Chr11 3603593 3615762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0426 13 818 Primary Pumps ATPases(2) AT4G39080 77.847 0.0 1310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0426 K02154 - gmx:100783125 1513.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0426 11 3603593 3615762 Pvu11g0426 11 3603593 3615762 ECH