Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0425 ATGGAAAGAGAAGTGTTGTCGTTCTCTCTTCTTCTTCTCTGGGTGCCGCTATGCTTCCAAATATGTGTGGGAGTTGATACTCTGAAGGCTACCCAGAAGATAACTCACCCAGGAAACCTTGTTTCATCAAACGCCACATTTGAGCTGGGTTTCTTTTCTCCTCCTGGTGTGAAGAACGGCGAGAAAAGATACCTGGGGATATGGTATCACGGGCTGGACCCACAAACAGTGGTGTGGGTTGCCAACAGAGATGATCCCGTTGCAGATTCCAGTGGAGTTTTTCGAATTGCGGAGGATGGAAATGTGGTGGTTGAATATGCATCCAAAAGGCACTGGTCCTCCGAACTTGAACCATCCTCGTCCACAAACCGAACATTGAAGCTCCTAGATTCGGGGAATCTAGTACTAATAGATGACTCTCAAACGACATACCTGTGGCAAAGCTTCCAACACCCAACAGACACGTTTCTTCCCGGCATGAAAATGGACGCGACTCTGTCGTTGACTTGTTGGAGAAACTCCGCTGACCCAACACCCGGGAGCTTCACCTTCAAGCAGATTCAACTCGAAGAGAAACAAAGCTTCCGTGTGGAAAACGAATCACAAATCTACTGGGCACTTGAAGAACTCGACTCAGAACCGGCTTCCCTGACGGTATTTAATCTGTTGAACAACGACACCTCGGCTACTAAATCGTACAATTATTCTAACAAAACACTCTTCGTGTCACAACCTTACATGTACAATAAATCAAGGCTGGTGATGAATTCTAGCGGCGAGATACTGTTTCTGCAGTGGGATAAGAAAGAATCCCAATGGAATAAGAAATGGTCGGGGCCAAAGGACAAGTGTGACACATATAATTATTGCGGGAACTTCGGCGTATGTAACAGAGATAACTACTTTCGGTGCAAATGTTTGCCAGGATTTTCTCATAGTTTTCTTTCTAATGGAGAATCCAAGTCCAAAGGGTGTAGCAGAAAATCAATATCGTGTACCAGCAACGTGACGTTCCTGAACTTAACCAACATAAAACTGCGCAACCCAGACCAAGGATTTCATACTCAAACAGAAGCAGAATGCAAATCCTCATGCATCGACACGTGTTCCGAATGCCAGGCATATTCGTTTAATAATTCTAGATACAATGATCGTGGTTCATACTCATGCAATATCTGGACGCGGAATTTACCTTCTCTTCTTGAGAACTACCAGCAAGGTCGTGATCTTTCTATCTGGGTCAACACAGCAGATATAGCACCAACTGCAAGATCGTGTGAACCTTGCGGCACATATGCAATTCCTTATCCTCTCAGCACTGGGCCAAACTGTGGAGATCCCTTGTACAATAAGTTCAATTGCACAAAATCCACTGGCAAAGTTAGTTTCATGATGCCAGGAGGAATATCATACCCAGTAACTTGGATCGATGAAGATACCAGAGTGTTTTTCATTCAACCAGACTATAACAATTCGTTTGATTCCAGTTTCAACCCTCGAAATAGCTTCGATTTTCCGTTTAGTGTAACCAAGTACACTGAAGGGGTAATACAAATCAATTGGCTACCAGCGCCAGAACCGCCGTGTAGTAAGCTTATAGATTGCATCAATTGGCCAAATTCGACATGCAGAGCAACGGGGGAAGGAGAAAGTAGGTGTTATTGTGATTCAAACTATATTTGGAATAACACAATTATGAGATGCACCCGAGAAGCACCATCAGGAAATCATTCAACCCGACTGAAATTGATTCTTTTAGTAACTCTTGGTTCCCTGGCTACTGTGGCATGCATAACAGCATTTGGCATTGTGTGGAAAAAGAAAAAGGCCCTTAAGCTTGATCGCGCAAGCACCCGAATTCAGGAGAGCTTGCATGAGAGTGAAAGACATGTGAAAGGTCTGATTGGTTTAGGAAGTTTAGAAGAAAAAGGCATTGAAGGCATTGAAGTGCCCTGTTACACTTTTGCAAGCATTCTTGCAGCTACAGATAATTTCTCAGACTCTAACAAGCTTGGAAGAGGAGGTTATGGACCTGTTTATAAGGGAACATTTCCTGGAGGTCAAGAAATAGCTGTAAAGAGACTTTCAAGTGTTTCCACTCAAGGCCTAGAAGAATTCAAGAATGAAGTTATTTTGATTGCCAAACTTCAACATCGGAACCTAGTCAGACTGAGGGGCTACTGCATAAAAGGAGTTGAAAAAATCTTACTTTATGAATACATGCCAAACAAGAGCTTGGACTCAATTATATTTGACCGAAGTCGAACTATACTCTTAGATTGGCCAATGCGGTTTGAGATAATTGTGGGCATTGCACGAGGCATGCTTTACCTTCACCAAGACTCCAGATTGAGAGTGATTCATAGAGACCTGAAAACCAGCAATGTTCTTCTAGACAAGGAAATGAATCCAAAGATATCAGACTTTGGCCTTGCAAAAATATTTGGAGGAAAAGAAACTGAAGCAAGTACAGAGAGAGTGGTGGGAACCTTTGGGTACATGGCTCCAGAGTACGCTTTGGATGGATTTTTTTCAGTCAAATCTGATGTTTTCAGCTTTGGAGTAGTCCTACTAGAGATTCTTAGTGGGAAGAAGAACACAGGATTCTACGAGTCCAAACAAATTTCTAGCCTTTTGGGTTATGCATGGAATTTATGGTCAGGGAACAAGCTACTGGATTTAATGGATTCGTGCCTTGGTGAAACATGCAACAAAAATCAATTCATTAAGTGTGCAATTATTGGACTATTATGCACACAAGATGAACCAATTGATCGACCCACTATGTCAAATATTTTATATATGCTTGACATAGAGACAACAACCATGCCAATTCCCAGACAACCAACATTTTTTATGACCAAGCGTTATTCTAGCTCAGCTTCCTCTTCGACCAATCCAGAAATAAGCTTGCATCTTGACACTAGTTATAAACAAGGTCGATAA 2946 0.4236 MEREVLSFSLLLLWVPLCFQICVGVDTLKATQKITHPGNLVSSNATFELGFFSPPGVKNGEKRYLGIWYHGLDPQTVVWVANRDDPVADSSGVFRIAEDGNVVVEYASKRHWSSELEPSSSTNRTLKLLDSGNLVLIDDSQTTYLWQSFQHPTDTFLPGMKMDATLSLTCWRNSADPTPGSFTFKQIQLEEKQSFRVENESQIYWALEELDSEPASLTVFNLLNNDTSATKSYNYSNKTLFVSQPYMYNKSRLVMNSSGEILFLQWDKKESQWNKKWSGPKDKCDTYNYCGNFGVCNRDNYFRCKCLPGFSHSFLSNGESKSKGCSRKSISCTSNVTFLNLTNIKLRNPDQGFHTQTEAECKSSCIDTCSECQAYSFNNSRYNDRGSYSCNIWTRNLPSLLENYQQGRDLSIWVNTADIAPTARSCEPCGTYAIPYPLSTGPNCGDPLYNKFNCTKSTGKVSFMMPGGISYPVTWIDEDTRVFFIQPDYNNSFDSSFNPRNSFDFPFSVTKYTEGVIQINWLPAPEPPCSKLIDCINWPNSTCRATGEGESRCYCDSNYIWNNTIMRCTREAPSGNHSTRLKLILLVTLGSLATVACITAFGIVWKKKKALKLDRASTRIQESLHESERHVKGLIGLGSLEEKGIEGIEVPCYTFASILAATDNFSDSNKLGRGGYGPVYKGTFPGGQEIAVKRLSSVSTQGLEEFKNEVILIAKLQHRNLVRLRGYCIKGVEKILLYEYMPNKSLDSIIFDRSRTILLDWPMRFEIIVGIARGMLYLHQDSRLRVIHRDLKTSNVLLDKEMNPKISDFGLAKIFGGKETEASTERVVGTFGYMAPEYALDGFFSVKSDVFSFGVVLLEILSGKKNTGFYESKQISSLLGYAWNLWSGNKLLDLMDSCLGETCNKNQFIKCAIIGLLCTQDEPIDRPTMSNILYMLDIETTTMPIPRQPTFFMTKRYSSSASSSTNPEISLHLDTSYKQGR* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0425 981 CDD EGF_CA 282 311 - -
Pvu11g0425 981 SUPERFAMILY Protein kinase-like (PK-like) 651 969 IPR011009 -
Pvu11g0425 981 SMART blect_4 31 152 IPR001480 -
Pvu11g0425 981 ProSiteProfiles Bulb-type lectin domain profile. 25 149 IPR001480 -
Pvu11g0425 981 ProSiteProfiles EGF-like domain profile. 280 316 IPR000742 -
Pvu11g0425 981 Pfam PAN-like domain 332 398 IPR003609 -
Pvu11g0425 981 CDD B_lectin 40 152 IPR001480 -
Pvu11g0425 981 Pfam Protein tyrosine and serine/threonine kinase 668 933 IPR001245 GO:0004672|GO:0006468
Pvu11g0425 981 Gene3D Transferase(Phosphotransferase) domain 1 741 944 - -
Pvu11g0425 981 SMART serkin_6 665 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0425 981 Pfam S-locus glycoprotein domain 242 312 IPR000858 GO:0048544
Pvu11g0425 981 ProSiteProfiles Protein kinase domain profile. 665 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0425 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Pvu11g0425 981 Pfam D-mannose binding lectin 76 164 IPR001480 -
Pvu11g0425 981 CDD STKc_IRAK 671 937 - -
Pvu11g0425 981 Gene3D - 21 150 IPR036426 -
Pvu11g0425 981 ProSiteProfiles PAN/Apple domain profile. 332 417 IPR003609 -
Pvu11g0425 981 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 175 IPR036426 -
Pvu11g0425 981 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 16 979 - -
Pvu11g0425 981 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 979 - -
Pvu11g0425 981 Gene3D Phosphorylase Kinase; domain 1 640 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0425 Pvu-Chr11 3591812 3595696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0425 655 956 Receptor kinase-like Gene Family AT4G23140 57.143 6.57e-123 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g0425 PK_Tyr_Ser-Thr 4.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0425 - - vun:114185132 1577.38