Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0393 ATGGGTGAAAATGAAGAGGCCACCAATGACATGATGCAGAGGCTTCACTGTTCTTCGTTTCTGAAACAGCCGTTGAACATGGAGCAACTCAGCATCCCGCAGTTCAATCCCTCGCAAATGCGCGCCAGGCATCAGCATCAGCATCAGCATCAGTTCGACGGTGGGAACAGTAACAAGCGCGCGGGTATACCACCTTCGCACCCGCACCAGATCCCGCCCATTTCGCCCTACTCTCAGATCCCGGTGACGCGTCAGCAGCAAATGGGGTCGCACAACATTTCCCCTACACCCACCCACACGCGATCACTCTCGCAGCCTTCCTTTTTCTCCCTCGACTCCCTCCCTCCCCTCAGCCCTTCCCCCTTCCGCGACTCCTCCTCTACATCTGTCTCGGAAGCTGCTGACGTGTCCATGGAGGATCGTGACGTCACTTCTCACTCCCTCTTGCCACCCTCACCTTTCGCCAGAACACTCAACACCTCAACCAACAGCAATTTGCCTTTACCCCCTCGCAAAGCGCATAGACGCTCTAACAGTGATATTCCATTTGGGTTTTCCACCGTTTTGCAATCTTCGCCACCGCTTATTCCACTCCGGGGCAGAGAAAACCCCGTTTTGGCGAAACCTGCTCAATTGGTCAAAAGAGAAACACCGTGGGACAGGGGTGTTGACCACAGCAATGTAGAGGGATCCGGGGAGAAGAAATCCCCGGAAGGGGAAGTTGTGGATGATCTTTTCTCTGCTTACATGAATTTAGATAGCTTTGATGCGTTGAACTCTTCTGGAACCGATGATAAAAACGGGACTGAAAATCGCGATGATTTGGATAGTAGAGCGAGTGGGACCAAGACTAATGGTGGTGACAGTAGTGATAATGAAGCTGAGAGTAGTGTTAATGAGAGTGGGGATGGTGCGGTGAGGCAGGGAGGGAGTGAGAAGAGGGAAGGGATGAAGAGGAGTGCGGGTGGGGAGATTGCACCCACCACCAGGCACTATAGGAGTGTCTCCATGGATAGTTTCATTTCGAAGTTGAACTTCGGTGATGAGTCGCCGAAGCTGCCACCGTCGCCGGGGCCGAGAACTGGTTTGATTTCGCCTGCCGGTGGAGTTGATGGCAATTCATCGGCCTTCAGCTTGGAGTTTGGAAATGGGGAGTTTAGTGGGCCTGAATTGAAGAAAATTATGGCCAATGAAAAACTTGCTGAGATTGCCTTGACCGATCCAAAGCGTGCAAAAAGGATTTTGGCTAACCGGCAATCGGCTGCACGATCCAAAGAGCGGAAGATGAGGTACATATCTGAGCTAGAGCATAAGGTTCAGACACTACAGACGGAAGCCACCACACTATCTGCACAGCTTACTCTGTTACAGAGAGATTCTGCTGGACTCACTAATCAGAATAGCGAGTTGAAATTTCGCCTTCAATCCATGGAACAACAAGCAAAGCTCCGAGATGCTCTAAATGAGGCTCTTACTGCCGAGGTTCAAAGACTAAAGATTGCTACAGCTGAACTTAGTGGGGATTCACATGGTTCTAGCTGTTTGATTCCTCAACATTCTGTCAACCCTCTGATGTTCCAGCAGCAGCAGCCTCCCACTGCATCCCAACAAAACATTCATCTTCAACAGCAGCAGCAGCACCACCAGAATGGTAATGGCAACTCAAATTCCGACATAAAACAATAG 1686 0.5071 MGENEEATNDMMQRLHCSSFLKQPLNMEQLSIPQFNPSQMRARHQHQHQHQFDGGNSNKRAGIPPSHPHQIPPISPYSQIPVTRQQQMGSHNISPTPTHTRSLSQPSFFSLDSLPPLSPSPFRDSSSTSVSEAADVSMEDRDVTSHSLLPPSPFARTLNTSTNSNLPLPPRKAHRRSNSDIPFGFSTVLQSSPPLIPLRGRENPVLAKPAQLVKRETPWDRGVDHSNVEGSGEKKSPEGEVVDDLFSAYMNLDSFDALNSSGTDDKNGTENRDDLDSRASGTKTNGGDSSDNEAESSVNESGDGAVRQGGSEKREGMKRSAGGEIAPTTRHYRSVSMDSFISKLNFGDESPKLPPSPGPRTGLISPAGGVDGNSSAFSLEFGNGEFSGPELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKIATAELSGDSHGSSCLIPQHSVNPLMFQQQQPPTASQQNIHLQQQQQHHQNGNGNSNSDIKQ* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0393 561 CDD bZIP_plant_RF2 410 461 IPR044759 GO:0003700|GO:0006355
Pvu11g0393 561 MobiDBLite consensus disorder prediction 76 134 - -
Pvu11g0393 561 MobiDBLite consensus disorder prediction 207 239 - -
Pvu11g0393 561 MobiDBLite consensus disorder prediction 258 331 - -
Pvu11g0393 561 Gene3D - 409 461 - -
Pvu11g0393 561 MobiDBLite consensus disorder prediction 527 561 - -
Pvu11g0393 561 Pfam bZIP transcription factor 409 467 IPR004827 GO:0003700|GO:0006355
Pvu11g0393 561 MobiDBLite consensus disorder prediction 38 179 - -
Pvu11g0393 561 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 407 470 IPR004827 GO:0003700|GO:0006355
Pvu11g0393 561 SUPERFAMILY Leucine zipper domain 409 460 IPR046347 GO:0003700|GO:0006355
Pvu11g0393 561 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 74 557 - -
Pvu11g0393 561 MobiDBLite consensus disorder prediction 150 168 - -
Pvu11g0393 561 PANTHER ZIPPER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 74 557 - -
Pvu11g0393 561 MobiDBLite consensus disorder prediction 346 369 - -
Pvu11g0393 561 MobiDBLite consensus disorder prediction 214 239 - -
Pvu11g0393 561 MobiDBLite consensus disorder prediction 280 304 - -
Pvu11g0393 561 Coils Coil 425 480 - -
Pvu11g0393 561 SMART brlzneu 405 469 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0393 Pvu-Chr11 3309634 3313584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0393 1 528 bZIP Transcription Factor Family AT4G38900 58.559 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu11g0393 bZIP_1 2.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0393 - - gmx:778145 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0393 11 3309634 3313584 Pvu11g0393 11 3309634 3313584 ECH