Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0388 ATGGGTTTCCGCATAGCAGGTATTATCAGATGGGCATCACCTTCTACAACCCAAGCATCGTCCAAGGGGGTTGAGGTACCTAGAGGCTATCTTGCAGTCTATGTTGGAGACAAGATGAAGCGGTTTGTGATTCCTGTATCATACTTGAACCAACCTTCATTTCAAGAATTACTAAGTCGGACAGAAGAAGAATTTGGGTATGATCATCCAGCAGGTGGTCTCACAATCCCATGTCAGGAGGATGAGTTCCTAAACATCACCTCTTGCTTGAATGATATGTAA 282 0.4397 MGFRIAGIIRWASPSTTQASSKGVEVPRGYLAVYVGDKMKRFVIPVSYLNQPSFQELLSRTEEEFGYDHPAGGLTIPCQEDEFLNITSCLNDM* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0388 93 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 92 - -
Pvu11g0388 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 92 IPR003676 GO:0009733
Pvu11g0388 93 Pfam Auxin responsive protein 17 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0388 Pvu-Chr11 3270439 3271018 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0388 15 92 Calmodulin-binding Proteins AT3G43120 43.590 1.58e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0388 K14488 - gmx:100789280 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0388 11 3270439 3271018 Pvu11g0388 11 3270439 3271018 ECH