Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0386 ATGGCTTTTCGCATCCCAAGTATTATTAGACAAGCATCATTTTCTACTGCGAAAACAACTCGCAAGGGACTTGAAGTCCCAAAAGGCTATCTTGCAATCTATGTTGGAGATAAGATGAGGCGGTTCATGATTCCAGTATCATTTTTGAATCAACCTTCATTTCAACAATTGCTAAGTCTATCAGAAGAAGAATTTGGATATGATCATCCAACTGGAGGTCTCACAATTCCATGCAAGGAGGATGAGTTCCTAAACGTTATCTCTCAATTGAATGAGCAGTAA 282 0.3865 MAFRIPSIIRQASFSTAKTTRKGLEVPKGYLAIYVGDKMRRFMIPVSFLNQPSFQQLLSLSEEEFGYDHPTGGLTIPCKEDEFLNVISQLNEQ* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0386 93 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 92 - -
Pvu11g0386 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 92 IPR003676 GO:0009733
Pvu11g0386 93 Pfam Auxin responsive protein 13 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0386 Pvu-Chr11 3264820 3265334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0386 25 83 Calmodulin-binding Proteins AT3G43120 55.932 2.66e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0386 K14488 - gmx:100782363 159.073