Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0381 ATGGGTTTTCGTTTACCTGGTATCAGAAAGGCCTCCCTTCCTTCAATCCAAGCATTTTCAAAAGCTGTGGACGTGCCAAAGGGTTACATTGCAGTCTATGTCGGAGATAAAATGAAGCGGTTCATGATCCCTGTATCTTACGTGAACCAACCTTCATTTCAAAATTTGTTGAGTAAAGCTGAGGAAGAATTTGGGTATGATCATCCACTGGGTGGTCTCACAATTCCTTGTGGAGAAGATGTGTTCTTAGATATCACTTCTCGCTTCAATAGATGTTAA 279 0.4122 MGFRLPGIRKASLPSIQAFSKAVDVPKGYIAVYVGDKMKRFMIPVSYVNQPSFQNLLSKAEEEFGYDHPLGGLTIPCGEDVFLDITSRFNRC* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0381 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Pvu11g0381 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Pvu11g0381 92 Pfam Auxin responsive protein 20 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0381 Pvu-Chr11 3224391 3224860 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0381 24 82 Calmodulin-binding Proteins AT3G43120 55.932 7.61e-19 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0381 K14488 - gmx:100795597 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0381 11 3224391 3224860 Pvu11g0381 11 3224391 3224860 ECH