Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0380 ATGGGGTTTCGTTTACCTGGTATGAGAAAGACATCATTTGCTACAAACCAAACATCTTCGAAGGGCTTGGATGTGGCAAAGGGCTACCTTGCCGTCTATGTAGGAGAGAGACTGAAGCGGTTTGTAATCCCTGTATCATTCTTGAACCAACCTTTATTTCAAGACTTGTTGAGTCAAGTGGTGGAAGAATTTGGATATGATCACCCAATGGGTGGTCTCACAATTCCTTGTGGAGAAGATGTGTTCTTGGATATCACTTCTCGCTTGATGAGGTGCTAA 279 0.4337 MGFRLPGMRKTSFATNQTSSKGLDVAKGYLAVYVGERLKRFVIPVSFLNQPLFQDLLSQVVEEFGYDHPMGGLTIPCGEDVFLDITSRLMRC* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0380 92 Pfam Auxin responsive protein 11 88 IPR003676 GO:0009733
Pvu11g0380 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Pvu11g0380 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0380 Pvu-Chr11 3221569 3222106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0380 14 92 Calmodulin-binding Proteins AT3G43120 48.101 5.05e-19 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0380 K14488 - gmx:112998524 150.214