Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0366 ATGGCAGTTGAAAAGAGGTTTGTTTTGGTTGGGATTAGAATTGATTGCCATTGTAGACAGCTTCTCAACTGGGCCCTTGTCAAAGTTGCTGAACCAGGGGATTGTGTTGTAGCAATCCATGTTGTTAAAAATCCAGATCATGTTTCCAAAAGCAATAATCTGATAGATGACTATTTAGAAGTTTATGAAGGGCTATGTGGTGTTAAGAAGGTAGATCTCAGTGGTCAAATCTTCTATGGAAGATCCGTTCGAAACATTCTTGTTAGAGAAGCAAAAAAACATGATGCTCTGGCTCTAGTGGTAGGGGGTCGAGCTGGCTTAGCTAAATATTGCGCCAAACAACTACCACTCACCACCAATGTTCTAGCCATCCAAGGCTCAAGGATTGTCTATAGGAATTGCACCAACGAACAACAACCAGGTGGTCTTATAATGGATCCAAGACCAAGCTTAAAAACCATAGGAAAAAACTTGAGTGACAAAGTAAACCAGTCTACATTTGGTGACTCCACCCTGGAGATTGAGAAATCAGCAACCAAAAATTCCTTAGAATTGAAGGAAGAAGCATTTAACGGAGTGGGAAAGGCCAAGTCAAGGTCAATATCCATGTTTGCAGGTGATTCAGCTGAGCAGAAGAAGCTCGGGTGGCCTCTACTCCGAGGAGCCAACTCGGGAACGTCACAAACCCATAATGCAAGGGATATGCCAGTAGTACAATGGGTAATGACCTTACCAGATCGTTCACCGTGTAAAAGTCCCTGGTCTTCTTCCTCTGAGGAAAATCCATTTGAAAGGAGCATCAGCGATATTGATGATGAGAGCTCCAAATTTTCTTCAGCTCCATCTGTTGAGCTACCAAATGGCCTAGAGGAGATGCTACGCGTAAATTCAATCGACTGCAAATGGTTCAGCCTTGAAGTTCTGCAGTCTTGCACTAGACAATTTTCTTCAGAAAACTTGGTTGGAAAAGGAGGGAGCAATCGTGTGTACAAAGGAGTCCTGCCTGATGGAAAGCCTGTGGCAGTTAAAGTATTGCATTCATCAAAAGAAGCCTGGAAAGATTTTGCCCTTGAGGTGGAAATAATATCCCCATTGAGGCACAAAAACATTACCCCTCTACTTGGGATTTGCACAGAGAACAATACTTTAATCTCAGTTTATGATTATTTGCCCCAGGGCAGCTTAGAGGAAAATCTGCATGGAAAGAGCAAATTGTCATGGGAAATGAGATTTAATGTGGCAGTTAGGATCGCTGAAGCCCTCGATTACATACACAGGGAAGCTTTGAAGCCTGTTATACATAGAGATGTCAAGTCTTCTAACATTCTTCTTACCCAAGGGTTTGAACCTCTGTTATCTGATTTCGGACTTGCAACATGGGGACCAACAACTTCATCCTTTTTGACTCAAGATGTAGTAGGAACATTTGGTTATCTTGCTCCTGAATACTTCATGTATGGAAAGGTCAGTGACAAGATAGATGTTTATGCCTTTGGTATAGTTCTACTTGAACTAATATCAGGAAGGGAACCAATCAGCTCAGCAGCTTGCAAAGGACAGGAGAGCTTGATCGTGTGGGCAAAACCAATAATAGATAGTGGGGACATTAAAGGCTTATTGGACCCAGAATTAGAAGGGAAATATGATGAGGTACAATTGCAGAGAATGGTTATGGCAGCATCTTTATGCATCACACGGGCTGCTCGACTTCGTCCTAAACTGAATCAGATACTGAAGATCCTAAAAGGGGATGAGAAAGTTGAATATTTGCTGAACTCGCATGGGAACAATGAGGAGGATTCAGAAAATGGAGAAAACATTGATGATGAAGTGTATCCAAGTTCAAGTGCAGAGTTACACCTGAGTCTTGCTTTACTTGGTGTGGACGAAGACAATACGTCACAAACTAGCACTGAGCTCAGCTATAGTGAGCACTTGAAAGAACAATGGAGCAGGTCATCAAGTTTCAATTAG 1974 0.422 MAVEKRFVLVGIRIDCHCRQLLNWALVKVAEPGDCVVAIHVVKNPDHVSKSNNLIDDYLEVYEGLCGVKKVDLSGQIFYGRSVRNILVREAKKHDALALVVGGRAGLAKYCAKQLPLTTNVLAIQGSRIVYRNCTNEQQPGGLIMDPRPSLKTIGKNLSDKVNQSTFGDSTLEIEKSATKNSLELKEEAFNGVGKAKSRSISMFAGDSAEQKKLGWPLLRGANSGTSQTHNARDMPVVQWVMTLPDRSPCKSPWSSSSEENPFERSISDIDDESSKFSSAPSVELPNGLEEMLRVNSIDCKWFSLEVLQSCTRQFSSENLVGKGGSNRVYKGVLPDGKPVAVKVLHSSKEAWKDFALEVEIISPLRHKNITPLLGICTENNTLISVYDYLPQGSLEENLHGKSKLSWEMRFNVAVRIAEALDYIHREALKPVIHRDVKSSNILLTQGFEPLLSDFGLATWGPTTSSFLTQDVVGTFGYLAPEYFMYGKVSDKIDVYAFGIVLLELISGREPISSAACKGQESLIVWAKPIIDSGDIKGLLDPELEGKYDEVQLQRMVMAASLCITRAARLRPKLNQILKILKGDEKVEYLLNSHGNNEEDSENGENIDDEVYPSSSAELHLSLALLGVDEDNTSQTSTELSYSEHLKEQWSRSSSFN* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0366 657 Pfam Protein kinase domain 317 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0366 657 Gene3D Transferase(Phosphotransferase) domain 1 390 596 - -
Pvu11g0366 657 Gene3D Phosphorylase Kinase; domain 1 283 389 - -
Pvu11g0366 657 MobiDBLite consensus disorder prediction 249 282 - -
Pvu11g0366 657 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK7 ISOFORM X1 3 638 - -
Pvu11g0366 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Pvu11g0366 657 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 8 104 - -
Pvu11g0366 657 ProSiteProfiles Protein kinase domain profile. 315 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0366 657 SUPERFAMILY Protein kinase-like (PK-like) 297 581 IPR011009 -
Pvu11g0366 657 SMART serkin_6 315 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0366 657 PANTHER OS08G0249100 PROTEIN 3 638 - -
Pvu11g0366 657 CDD USP_Like 8 109 - -
Pvu11g0366 657 MobiDBLite consensus disorder prediction 249 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0366 Pvu-Chr11 3127650 3132148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0366 303 581 Trihelix Transcription Factor Family AT1G70460 42.308 3.21e-71 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pvu11g0366 Pkinase 8.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0366 - - gmx:100789189 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0366 11 3127650 3132148 Pvu11g0366 11 3127650 3132148 ECH