Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0354 ATGTGTAGAACGATCGCGTTTCTCGTTCACCCACGAGTCCTCCTTCTCTTCCTTGTTCTCTCAATTTTCCTCATTTTCACGTATACTGGTTCTACTACTACTTATGATTCTACTACTCCAAAACTGGTTGTTGAGGAGAAAATAGAAGAGGTTCATGAAATTACACATAGAGTATTCTTGGACATTGATATTGATAAACAGCGTTTAGGTAGGATAGTGATTGGATTATATGGCCAAGTTGTACCGAAAACTGTGGAAAATTTTATAGCTTTGTGTACAGGGCGGAAAGAAAAGAGTGAAAATGGTGTAAAGCTTCATTACAAAGGGGGGACACCATTTCATCGGATAGTATCTGGTTTTGTGATTCAGGGTGGAGACATTGTTCATCATGATGGTAAAGGGTCTGAATCTATTTATGGTGGCACCTTTCCTGATGAGAATTTCAAGATTAAACATTCTCATGCTGGCGTTGTCTCTATGGCAAATTCAGGACCTGACTCCAATGGCTCACAGTTTTTCATTACCACGGTGAAGGCCAGTTGGTTGGATGGAGAGCATGTTGTATTTGGCAAGGTTGTAGAAGGCATGGATATTGTGTATGCAATTGAAGGGGGAGCTGGAACCTACAGTGGAAAACCCAGAAAGAAGGTAGTGATAGCAGACTCTGGGGAGATACCCAAGAGTGAGTGGGATGAGGAAAGTTGA 705 0.4156 MCRTIAFLVHPRVLLLFLVLSIFLIFTYTGSTTTYDSTTPKLVVEEKIEEVHEITHRVFLDIDIDKQRLGRIVIGLYGQVVPKTVENFIALCTGRKEKSENGVKLHYKGGTPFHRIVSGFVIQGGDIVHHDGKGSESIYGGTFPDENFKIKHSHAGVVSMANSGPDSNGSQFFITTVKASWLDGEHVVFGKVVEGMDIVYAIEGGAGTYSGKPRKKVVIADSGEIPKSEWDEES* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0354 234 Gene3D - 44 231 IPR029000 -
Pvu11g0354 234 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 59 224 IPR002130 GO:0000413|GO:0003755
Pvu11g0354 234 SUPERFAMILY Cyclophilin-like 52 225 IPR029000 -
Pvu11g0354 234 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 28 234 - -
Pvu11g0354 234 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 28 234 - -
Pvu11g0354 234 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 62 222 IPR002130 GO:0000413|GO:0003755
Pvu11g0354 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 91 IPR002130 GO:0000413|GO:0003755
Pvu11g0354 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Pvu11g0354 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 156 171 IPR002130 GO:0000413|GO:0003755
Pvu11g0354 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 171 183 IPR002130 GO:0000413|GO:0003755
Pvu11g0354 234 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 184 199 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0354 Pvu-Chr11 3001612 3005574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0354 70 222 U-box Gene Family AT5G67530 43.506 6.32e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0354 - - gmx:100800775 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0354 11 3001612 3005574 Pvu11g0354 11 3001612 3005574 ECH