Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0317 ATGTCGCGCCAGGCCCTGAACACGGCCTTCACTAAATCGAAGACGCTCGACAATAAATATATGCTGGGAGATGAGATTGGGAAAGGAGCTTATGGTCGAGTTTACAAAGGTTTGGACCTGGAGAATGGAGATTTTGTTGCCATTAAACAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTCAACATCATCATGCAAGAGATTGATTTGTTAAAGAATCTGAACCACAAAAACATTGTAAAGTATCTTGGATCTTCTAAGACAAAAAGTCACCTGCACATAGTTCTTGAGTACGTAGAGAATGGCTCACTTGCAAATATTATCAAGCCAAATAAATTTGGCCCTTTTCCGGAATCATTGGTTGCATTATATATAGCCCAGGTGTTGGAAGGTTTGGTTTATCTTCATGAACAAGGTGTTATCCATCGGGATATTAAGGGTGCAAACATACTGACAACTAAGGAGGGTCTTGTGAAACTAGCTGATTTTGGTGTTGCTACAAAACTAACAGAGGCTGATGTTAACACTCATTCAGTTGTTGGAACACCTTACTGGATGGCCCCAGAGGTTATAGAAATGGCCGGGGTTTGTGCAGCTTCAGACATTTGGAGTGTTGGCTGTACAGTGATTGAGCTTCTTACATGTGTACCTCCTTATTATGATTTGCAGCCTATGCCAGCTCTTTTCCGTATTGTCCAGGATGAGCACCCGCCAATTCCGGACAGCCTTTCACCTGATATTACTGATTTTCTGCTTCAATGCTTTAAGAAGGACTCTAGACAAAGGCCTGATGCTAAAACTCTGCTGTCTCACCCCTGGATTCAAAACTTTAGACGTGTTCTGCAGTCTTCTCTTCGTCATAGTGGAACACTAAGAAATATAGAGGAAGATGATTCTGCAGATGCAGAAGTTTCTGGTGGTTATCATAAGAGTGCTTACGAAGGCTCTTCTGTGGAGAAGGAGGACTCTTCAAAAGAGCTTTCGTCTGGGGCTGTTCATGACAGCAAATCTCATGAAGACAATGCTTCAGTTCCCAATGAAAGAACGGAGAAAGCAGATCATGTTCCATCAGATCAGGTTCTTACCTTAGCCATTCGTGAGAAGTCATTTCTACAAACTGGTTCTAGCAAACTCTCTCCTAATAGAGAAGTTGGTAATTCCGAGCCTACTGGTGATCATGAAATTTCAAATGCTAAAGACCTTCATGAAGTTATGATGAATGGAGAGGTTGGATCACCAAAATCAAAAGTAATGGCTAGTAAGACTGGAGGAAAAGACAGTTCTGTAAACAATGGTAACAAATCATTTGCTTTTGGGCCAAGAGGTCAGGATAATGGTTCCCTGAAGGCAATGAAGATGCCAACCACTGTGGAAGGAAATGAACTGAGTAGATTTAGTGACCCACCAGGAGATGCCTACTTAGATGATTTATTCCATGCATTGGATAAACAACCTGGGGAGGTTGCAGCAGAGGCGTCCACATCTACATCCACTTCTCATATGGTTAAAGGTAACACATCTAGAATTGATGGCGGGAAAAATGACCTGGCTAAAGAGTTGAGGGCCACAATTGCTCGAAAGCAGTGGGAGAAGGAAAGTGAAATTGGACAGGCAAACAATGGTGGGAATCTTTTGCATCGAGTTATGATAGGTGTTCTAAAAGATGACGTGATTGATATAGATGGTTTGGTCTTTGATGAAAAACTTCCAGGAGAGAACCTTTTTCCTTTGCAGGCTGTTGAGTTCAGCAAACTAGTTGGTTCATTAAAACCAGAGGAATCAGAAGATGTGATTGTCTCTGCATGTCAGAAACTTATTGGTATATTTAACCAACGCCCAGAGCAGAAGATTGTTTTTGTTACCCAGCATGGTTTACTTCCTCTAACAGATTTGCTAGAAGTTCCTAAAACACGTGTTATATGTTCTGTGCTTCAGCTTATAAATCAAATAGTTAAAGACAACACTGATTTTCTAGAAAATGCATGTCTTGTTGGATTGATTCCTGCAGTCACAAGCTTTGCAGTACCTGATCGTCCCCGAGAGATTCGTATGGAAGCAGCTTATTTTTTACAGCAGCTTTGTCAGTCAAGTTCTTTGACATTACAAATGTTTATCGCTTGCCGAGGAATACCAGTTTTAGTGGGATTTCTTGAGGCCGATTATGCCAAGTACAGCTGTATCGTGCGATTCGCACAAAGAATCGTTGAATCCCGAAACGAAACGATTCTGTATTGT 2235 0.4143 MSRQALNTAFTKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSSKTKSHLHIVLEYVENGSLANIIKPNKFGPFPESLVALYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMAGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLLQCFKKDSRQRPDAKTLLSHPWIQNFRRVLQSSLRHSGTLRNIEEDDSADAEVSGGYHKSAYEGSSVEKEDSSKELSSGAVHDSKSHEDNASVPNERTEKADHVPSDQVLTLAIREKSFLQTGSSKLSPNREVGNSEPTGDHEISNAKDLHEVMMNGEVGSPKSKVMASKTGGKDSSVNNGNKSFAFGPRGQDNGSLKAMKMPTTVEGNELSRFSDPPGDAYLDDLFHALDKQPGEVAAEASTSTSTSHMVKGNTSRIDGGKNDLAKELRATIARKQWEKESEIGQANNGGNLLHRVMIGVLKDDVIDIDGLVFDEKLPGENLFPLQAVEFSKLVGSLKPEESEDVIVSACQKLIGIFNQRPEQKIVFVTQHGLLPLTDLLEVPKTRVICSVLQLINQIVKDNTDFLENACLVGLIPAVTSFAVPDRPREIRMEAAYFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYSCIVRFAQRIVESRNETILYC 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0317 745 Gene3D Transferase(Phosphotransferase) domain 1 17 307 - -
Pvu11g0317 745 PANTHER MAP KINASE KINASE KINASE 2 731 - -
Pvu11g0317 745 SUPERFAMILY ARM repeat 583 721 IPR016024 -
Pvu11g0317 745 MobiDBLite consensus disorder prediction 372 398 - -
Pvu11g0317 745 MobiDBLite consensus disorder prediction 372 386 - -
Pvu11g0317 745 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Pvu11g0317 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Pvu11g0317 745 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0317 745 CDD STKc_Cdc7_like 19 274 - -
Pvu11g0317 745 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0317 745 Gene3D - 574 738 IPR011989 -
Pvu11g0317 745 MobiDBLite consensus disorder prediction 421 440 - -
Pvu11g0317 745 MobiDBLite consensus disorder prediction 492 513 - -
Pvu11g0317 745 MobiDBLite consensus disorder prediction 292 357 - -
Pvu11g0317 745 MobiDBLite consensus disorder prediction 412 448 - -
Pvu11g0317 745 MobiDBLite consensus disorder prediction 314 355 - -
Pvu11g0317 745 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Pvu11g0317 745 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Pvu11g0317 745 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Pvu11g0317 745 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Pvu11g0317 745 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0317 745 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 731 - -
Pvu11g0317 745 SUPERFAMILY Protein kinase-like (PK-like) 17 283 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0317 Pvu-Chr11 2628316 2641103 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0317 1 731 MAP Kinase Kinase Kinase AT3G13530 69.677 0.0 1016
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Pvu11g0317 Pkinase 1.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0317 - - pvu:PHAVU_011G0308000 1470.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0317 11 2628316 2641103 Pvu11g0317 11 2628316 2641103 ECH