Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0308 ATGACAAATGATGGTGCAGTGTGTGAAACTAAGTCTAGGTACGAAGTTTTCCTTAGCTTTAGGGGTGAAGATACCCGTTACACATTCACTTGTCATCTCTATCATGCTTTGTGCCGGAGGGGAATTATCACCTTCATGGATGATGCGGAACTCAAGCTTGGAGATCAAATTCGCCCTGTACTTCATAGAGCCATTGAAGAATCAAATATCTCCATTGTTGTTTTATCAGAAAACTATGCAGATTCTTCTTGGTGTCTTGATGAACTTGTGAAGATCATCGAATGCAAGGAGTCCAAAAACCAGCTCGTTTGGCCAATCTTCTACAAAGTGGATCCGTCAGATGTGAGACATCAGAATGGAAGTTATGGTGAGGCCATGATTAAGCATGAAAAAAGGTTTGGAAAAGACTCAGAGAAGGTGCTCAAATGGAGGTCAACCTTGAACGCCATAGCTGATATGACAGGAGAACATCTGAAATCTGAACAAGGGAGAGATGAATCCAAGTTTATTGATGATCTTGTTAGCAAGATTTTCCTGAAAGTGTCTCCTAAAGAATTGTCAAGTGATGAGAATATAGTAGGACGAGAGTATCGAGTCGAAGAACTGAAATCACTTCTGCATCTTAAGTCTGGTAATGTCACTTTCTTGGGGATTCATGGAACAGGTGGAATTGGCAAAACCACACTTGTCAAAGCTTTGTATGACTCCATTTACAAGGAGTTTGAGGGTTCATGTTTTCTTTCCAACGTTAGAGAAACTTCAAATCAAATTAAGGGTATAGAATTTCTGCAACAAAGGCTTCTATCAGAGATTCTTGAGGACAGAAAAATTCAGTTGGGAAGTAAAGAAGAAGGAACCAACACAATAAGACGTAGTCTAGCTTCAAAAAGAGTTCTTATAGTTCTGGACGATGTTGACAACATTGAACAGTTGGAAAACTTGGCAGGGAGAAGATTTTGGTTTGGGGATGGGAGCAGAATCATTGTAACAACGAGAGATCAACATTTGCTTGAGGTTGGTCAGATCAACAACAGATATGAAGTGGAAGTGCTAAACAACCAAGAATCTCTGGAACTCTTCTGTCAAAGTGCATTTAGAAAGAGTTGTCCTGAAACAAACTATGAAGATCTGTCAAATCGTGCAATAAGCTGCTGCAAAGGCCTTCCACTGGCCTTAAAACTTGTAGGCTCTCATATGATTGGAAAAGATTTGGGTGGATGGAAAGATGCATTGAAAAGATATGAAAAGAGTCCACATCCAGATGTTCAAAAAATTCTTAGAATAAGCTATGATAGCTTGCCCTTCAATGAAAAAAATATTTTTCTTGACATTGCATGCTTCTTCAAAGGGCAAAGATCAGAATATGTAGAAAGAGTATTGGATGCGTGTGATTTCAACTCAGGAGATGGCATTCGTACATTAGTTAATAAATCTCTATTAACTGTTCACAGCCAAAACAAATGTTTGGAGATGCATGACCTGATACAAGACATGGGTAAAGAGATTGTCAAGGAGGAAGCGTGGAATGAAATTGGTGAACGCAGCAGATTATGGTTTCATGAAGATGTTCTTCAAGTACTTGCTGATAATATGGGAAGTAGGAAGATTCAAGGACTAATGCTTGACCCCCCTCAAAGAGAAGAAATTAATTGTACTGAGACTGTGTTTGAGAATATGAAGAATCTCAGAATTCTCATTGTTCGTAATACCAGCTTTTCACGTGAGCCTAGTTGTCTCCCAAATAACTTAAGGCTACTTGATTGGAAGGATTACCCTTCACAGTCCTTCCCATCAGGATTTTATCCCAGGAAAATTGGGGCATTCAATTTAAGTAGAAGTCCTTTACTCGTACTGGAAGAGCCATTTAAGAGATTTCAGCATCTGACTTATATGAATATCTCTTACTGTGATACGGTTACTGAATTTCCTGATGTGTCTGGGGCCAAGAATTTGAGAGAATTGAGACTTGATGGATGCAAGAAACTCGTTACCATTCATGAATCAGTTGGACTTCTAACTAACCTTGTTTTCCTAAGTGCTTCAGAATGTACACTACTCAGAAGTTTTGTGCCAACAATCTATTTGCCTTCTCTTAAATACCTTTCCTTAAACCTCTGCACAAAACTAGCATTCTTTCCAGAAATTAGTGGAACGATGAACAACAAATTACAGATTAACATGGTGGACACAGCCATTAACATGCTTCCAGAATCCATCGAGAAACTTACTGGGCTTAACTTTCTTGAGATGACAGATTGCAAGGAACTTCAACATTTACCAAGTAGCTTATTTATGTTGCCAAATTTTGTCACATTAAAAGTTGGAGGATGTCGTCGACTTCGAGAGTCATTTATAAGGTTCGAAGGAAGCCATTCAGTTTGCCCAAAACTGGAGACATTACATTTCGACAATGCTTATCTATCAGACAAAGATGTTCGTATGATTATTTACCATTTTCCTAACCTGAAAGACTTAAACATATCGTGCAACCCCTTTATGTTTCTCCCAGCATGCATTAAACTATCTACTAAGTTGACAAGTCTTCACTTGAGGTATTGTCTTATGCTTCAAGAAATTCCAGCACTGCCGTCAAGTGTTCAGAAAGTAGATGCAAAATACTGCTATTCCTTAACTTCGGAGTCATCAAACATCTTATGGTCTCAGGTCCGTAGAGAGATGAAAAGATTAGAAGTGGTGATGCCGAAAAGGGTGATTCCAGAATGGTTTGATTATGTTAGTGAAGGAGGGTTTCCAGTTTTCAGAGCGCGTATAAAGTTCCCAGCTGTTGCTCTAGCTTTAGTGTTCAGTGAAGTGGATGCCAAAGCCAAGAGAGAAACAATGCCAGGTCGCTGGAAAACTGTTGGAATGCACTTATTCATTAAAGGTAAACGCAGACGGTACCATAATTTCGTTGCTTCCGAGAATCATGTGTTGTTGTGTGACCTGCGAGTTTTGTTCGGTTTTGAGGAGGGGGAGGATGCAGGTTTCGGAGTTGGTAAGGTTTGGAAGACCATACAAGTTTTCTGTGAAACAAACTTGAGTCTATGTTCATGGGGAGTTTATGTGTACAAAAGTGAGACTAACATGAAGGATATCAAGTTCATGAGTCAAGATCCCAGTTCCTCTTTGGTGTGGAGTCGTCACAAGATGATCAGTGATAAGGATAAAATATTAAGCAAGAGAACAAGTTTGAATTTACCAGCAATGCATAGGGAGTTTCACATGTGGAATAATTTTAAAGGAGAAAGTAGCCGAGTGTTGGAGAAAGCATGGAGGGCCATGGCCTTAACAGAGGGGGAAGGTAGATCAGGAATGAACATTGAGGATGAGAAGGATGAGGAGGTGGATTCACTGTTGGATACATTGGCAATGGAAGAACTTGATAAACATTTTAATTAA 3399 0.3939 MTNDGAVCETKSRYEVFLSFRGEDTRYTFTCHLYHALCRRGIITFMDDAELKLGDQIRPVLHRAIEESNISIVVLSENYADSSWCLDELVKIIECKESKNQLVWPIFYKVDPSDVRHQNGSYGEAMIKHEKRFGKDSEKVLKWRSTLNAIADMTGEHLKSEQGRDESKFIDDLVSKIFLKVSPKELSSDENIVGREYRVEELKSLLHLKSGNVTFLGIHGTGGIGKTTLVKALYDSIYKEFEGSCFLSNVRETSNQIKGIEFLQQRLLSEILEDRKIQLGSKEEGTNTIRRSLASKRVLIVLDDVDNIEQLENLAGRRFWFGDGSRIIVTTRDQHLLEVGQINNRYEVEVLNNQESLELFCQSAFRKSCPETNYEDLSNRAISCCKGLPLALKLVGSHMIGKDLGGWKDALKRYEKSPHPDVQKILRISYDSLPFNEKNIFLDIACFFKGQRSEYVERVLDACDFNSGDGIRTLVNKSLLTVHSQNKCLEMHDLIQDMGKEIVKEEAWNEIGERSRLWFHEDVLQVLADNMGSRKIQGLMLDPPQREEINCTETVFENMKNLRILIVRNTSFSREPSCLPNNLRLLDWKDYPSQSFPSGFYPRKIGAFNLSRSPLLVLEEPFKRFQHLTYMNISYCDTVTEFPDVSGAKNLRELRLDGCKKLVTIHESVGLLTNLVFLSASECTLLRSFVPTIYLPSLKYLSLNLCTKLAFFPEISGTMNNKLQINMVDTAINMLPESIEKLTGLNFLEMTDCKELQHLPSSLFMLPNFVTLKVGGCRRLRESFIRFEGSHSVCPKLETLHFDNAYLSDKDVRMIIYHFPNLKDLNISCNPFMFLPACIKLSTKLTSLHLRYCLMLQEIPALPSSVQKVDAKYCYSLTSESSNILWSQVRREMKRLEVVMPKRVIPEWFDYVSEGGFPVFRARIKFPAVALALVFSEVDAKAKRETMPGRWKTVGMHLFIKGKRRRYHNFVASENHVLLCDLRVLFGFEEGEDAGFGVGKVWKTIQVFCETNLSLCSWGVYVYKSETNMKDIKFMSQDPSSSLVWSRHKMISDKDKILSKRTSLNLPAMHREFHMWNNFKGESSRVLEKAWRAMALTEGEGRSGMNIEDEKDEEVDSLLDTLAMEELDKHFN* 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0308 1132 Pfam NB-ARC domain 195 432 IPR002182 GO:0043531
Pvu11g0308 1132 ProSiteProfiles TIR domain profile. 12 177 IPR000157 GO:0007165
Pvu11g0308 1132 SMART till_3 13 153 IPR000157 GO:0007165
Pvu11g0308 1132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 444 IPR027417 -
Pvu11g0308 1132 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 1028 IPR044974 GO:0006952
Pvu11g0308 1132 CDD ABC_ATPase 206 338 - -
Pvu11g0308 1132 PRINTS Disease resistance protein signature 215 230 - -
Pvu11g0308 1132 PRINTS Disease resistance protein signature 292 306 - -
Pvu11g0308 1132 PRINTS Disease resistance protein signature 385 399 - -
Pvu11g0308 1132 PRINTS Disease resistance protein signature 693 709 - -
Pvu11g0308 1132 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 19 1028 - -
Pvu11g0308 1132 Gene3D Ribonuclease Inhibitor 545 712 IPR032675 -
Pvu11g0308 1132 Pfam TIR domain 14 187 IPR000157 GO:0007165
Pvu11g0308 1132 Gene3D - 430 501 IPR036388 -
Pvu11g0308 1132 Gene3D - 11 184 IPR035897 -
Pvu11g0308 1132 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 155 IPR035897 -
Pvu11g0308 1132 Gene3D - 185 345 IPR027417 -
Pvu11g0308 1132 SUPERFAMILY L domain-like 491 876 - -
Pvu11g0308 1132 Gene3D - 350 429 IPR042197 -
Pvu11g0308 1132 Gene3D Ribonuclease Inhibitor 713 898 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0308 Pvu-Chr11 2539694 2544245 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0308 14 777 WRKY Transcription Factor Family AT4G12020 32.570 9.03e-96 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0308 - - gmx:100801890 1460.66