LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu11g0264	ATGTGGAGGGCAGCCTTAACAGAATTAACAGCAACTGCATCTCTAATGTTCACCTTGACAACTTCCATTGTTGCATGCTTGGACTCAGAGGAGGTGGATCCTAAGCTTCTTGTTCCCTTTGCAGTTTTCATCATAGCCTTTTTGTTCCTACTGGTGACAGTTCCTCTCTCTGGGGGCCACATGAGTCCTGTTTTCACATTCATTGGTGCTTTGAAGGGAGTTGTAACTCTCACCCGTGCTCTCATTTACGTCTTGGCACAATGCATTGGCTCAATAATTGGTTTCTTTATCCTAAAGTGCGTCATAGACCCCAAATTAGCCTACACATATTCCTTGGGAGGGTGTGCCATTGATGGGCAAAGAGTCAGTTTTGGCATTAAGGCACAGAACGCTTTGCTAGTGGAATTCGCATGCACATTTGTGGTACTCTTTGTGGGAGTCACATTGGCATTTGACAAGAAAAGGTCTAGGGAGCTGGGCTTGCCAATGGTGTGTTTGGTGGTGGCAGGAGCCATGGCACTGGCAGTGTTTGTGTCCATAACTGTAACTGGGCAGCCCGGTTATGCTGGTGTGGGCCTCAACCCAGCAAGATGCTTAGGCCCAGCACTGCTTCATGGAGGATCACTTTGGCACGGGCATTGGGTTTTCTGGCTTGGGCCTTTCTTGGCCTGCATGCTGTATTATGTTGTGTCTATCAACCTGCCAAAGGAGGATTTGGTTTGGGTAGAGGGAGAACATGATGTTTTAAACTTGGCTCTAGCTTCATGCTTCAATGTTTATGATACTTCCTTTTCAAAGGATCTGCCACAAGAACGCAGTGCAGGGTTCCAACTCCAAGTATGA	843	0.4721	MWRAALTELTATASLMFTLTTSIVACLDSEEVDPKLLVPFAVFIIAFLFLLVTVPLSGGHMSPVFTFIGALKGVVTLTRALIYVLAQCIGSIIGFFILKCVIDPKLAYTYSLGGCAIDGQRVSFGIKAQNALLVEFACTFVVLFVGVTLAFDKKRSRELGLPMVCLVVAGAMALAVFVSITVTGQPGYAGVGLNPARCLGPALLHGGSLWHGHWVFWLGPFLACMLYYVVSINLPKEDLVWVEGEHDVLNLALASCFNVYDTSFSKDLPQERSAGFQLQV*	281

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu11g0264	280	PANTHER	AQUAPORIN-LIKE	1	264	-	-
	Pvu11g0264	280	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	26	-	-
	Pvu11g0264	280	Gene3D	Glycerol uptake facilitator protein.	1	238	IPR023271	-
	Pvu11g0264	280	SUPERFAMILY	Aquaporin-like	2	229	IPR023271	-
	Pvu11g0264	280	Pfam	Major intrinsic protein	2	225	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Pvu11g0264	280	PRINTS	Major intrinsic protein family signature	3	22	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Pvu11g0264	280	PRINTS	Major intrinsic protein family signature	42	66	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Pvu11g0264	280	PRINTS	Major intrinsic protein family signature	79	98	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Pvu11g0264	280	PRINTS	Major intrinsic protein family signature	134	152	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Pvu11g0264	280	PRINTS	Major intrinsic protein family signature	175	197	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Pvu11g0264	280	PRINTS	Major intrinsic protein family signature	214	234	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Pvu11g0264	280	PANTHER	MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER	1	264	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu11g0264	Pvu-Chr11	2134437	2135279	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu11g0264	2	233	Major Intrinsic Protein MIP	AT3G61430	31.148	4.83e-24	96.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu11g0264	K09866		-	gmx:100804160	457.603

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu11g0264	11	2134437	2135279	Pvu11g0264	11	2134437	2135279	ECH