Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0263 ATGAATGACCAGTTTTCAATGCCCGTTCACAGTGCTGACACAAAGCCTAGGGGCTTAGTTCATAACAAGTCCAAATTTCTTGCCTTCATTGGTGCCCATGAAATTTTCACTGCAGAGACGTGGAAAGCTGCTATGGTAGAGTTAATTGCAACTGGTGCACTAATGTTCACCCTAACGAGTTGCAGTGTTGCATGTTTGGAATCAAAGGAGGTGAATCCCAAGCTTCTTATTCCCTTTGCAGTGTTCATCACAGTGTACTTGTTTTTGATTGTGATGGTTCCTGTATCCGGGGGTCATATGAATCCTATTTTCACATTCGTTGCGGCTTTAAAGGGTGTTGTCACCCTTTCTCGTGCTCTCCTTTACGTTCTAGCACAATGCATTGGCTCAGTAATTGGTTTCTTTGTGCTCAAGAGTGTGATGGAGCCAAAATTAGCACACACTTATTCTCTGGGAGGTTGTGCAATTGGTGACAAACTACAAAGTTCTGCCATAAATCCACACGATGCTCTGTTGTTGGAATTCTCTTGCACACTTTTGGTACTCTTTGTTGGTGTCACGGTGGCGTTTGATAAGAAAAGGTGCAAGGAATTGGGCTTTCCAATGGTGTGTTTCGTGGTAGCAGCATCCTTTGCACTCGCAGTTTTTCTGTCTATAACTGTAACAGGGAGGCCTGGTTATGCAGGTGTGGGCCTCAACCCGGCAAGATGTTTGGGCCCGGCGTTGCTTCACGGAGGCTCACTATGGAATGGGCATTGGATTTTCTGGGTCGGGCCTTTCTTGGCCTGTATAATCTATTATAGTGTCTCCATTATCTTACCAAAGAAGGGTTTGGATTGGGTGGATGGAGAATATGATATCCTAAACTTGACAATGGGTTTTTCTGGAACTATCCCTAACAATGCTGTTTTAAACGATCTTCCATAA 927 0.4423 MNDQFSMPVHSADTKPRGLVHNKSKFLAFIGAHEIFTAETWKAAMVELIATGALMFTLTSCSVACLESKEVNPKLLIPFAVFITVYLFLIVMVPVSGGHMNPIFTFVAALKGVVTLSRALLYVLAQCIGSVIGFFVLKSVMEPKLAHTYSLGGCAIGDKLQSSAINPHDALLLEFSCTLLVLFVGVTVAFDKKRCKELGFPMVCFVVAASFALAVFLSITVTGRPGYAGVGLNPARCLGPALLHGGSLWNGHWIFWVGPFLACIIYYSVSIILPKKGLDWVDGEYDILNLTMGFSGTIPNNAVLNDLP* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0263 308 Gene3D Glycerol uptake facilitator protein. 28 277 IPR023271 -
Pvu11g0263 308 SUPERFAMILY Aquaporin-like 39 265 IPR023271 -
Pvu11g0263 308 Pfam Major intrinsic protein 37 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g0263 308 PRINTS Major intrinsic protein family signature 42 61 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g0263 308 PRINTS Major intrinsic protein family signature 81 105 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g0263 308 PRINTS Major intrinsic protein family signature 118 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g0263 308 PRINTS Major intrinsic protein family signature 214 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g0263 308 PRINTS Major intrinsic protein family signature 253 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu11g0263 308 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 21 302 - -
Pvu11g0263 308 PANTHER AQUAPORIN-LIKE 21 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0263 Pvu-Chr11 2132584 2134170 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0263 93 266 Major Intrinsic Protein MIP AT1G17810 32.597 1.17e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0263 K09866 - gmx:100797262 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0263 11 2132584 2134170 Pvu11g0263 11 2132584 2134170 ECH