Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0255 ATGCACCATATCACGACAACACTACAGATACACTTCCATATGATGCTGTCGAATTTTCTGAATATAAATACCAGAACAAGTGACACCCCATTCAATTCAACACAACACAACACAAAGTTATTAAACTTCTCACAAAATTTCTTCATCATGATAAGTGCAAATAGGCTTATTGAAATGGCAAGAAAGTGGCAGAAAATGGCTGCGGGAAAACGCAAGAGAATTTCATACCCGAGGCACCTTGATAATGTTCATTCTTCAACACCAAACAAGGGTCACTTCGTGGTTTATAGCGTGGATCATGAGCGATTCGTGGTTCCTCTTAAGTACCTTAGCACCAACGTCTTCAAAGAGCTATTGAATTGGTCTGAAGAGGAGTTTGGGTTGCCATCGAATGGACCCATTACGTTACCTTGTGACAGCCTCTTCTTGGAGTACATAATCTCGTTGGTTCGGGAACATGTTCCCGAAGATGTTGAGAAGGCCTTGATCACTTCAATGGTTACGTGTCACCACGTGGCATCATCATCGTCATCGTCATCGTCGTCATCTTCTTCTTCTTCGCATGGTAATGGCCTTATGCAGAGCAACGGACAAAGGATTATTTATGGCTTTTGA 615 0.4211 MHHITTTLQIHFHMMLSNFLNINTRTSDTPFNSTQHNTKLLNFSQNFFIMISANRLIEMARKWQKMAAGKRKRISYPRHLDNVHSSTPNKGHFVVYSVDHERFVVPLKYLSTNVFKELLNWSEEEFGLPSNGPITLPCDSLFLEYIISLVREHVPEDVEKALITSMVTCHHVASSSSSSSSSSSSSSHGNGLMQSNGQRIIYGF* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0255 204 Pfam Auxin responsive protein 61 149 IPR003676 GO:0009733
Pvu11g0255 204 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 50 204 - -
Pvu11g0255 204 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 50 204 IPR003676 GO:0009733
Pvu11g0255 204 MobiDBLite consensus disorder prediction 174 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0255 Pvu-Chr11 2087638 2088487 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0255 55 150 Calmodulin-binding Proteins AT4G34750 33.333 7.89e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0255 - - gmx:100802572 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0255 11 2087638 2088487 Pvu11g0255 11 2087638 2088487 ECH