Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0253 AATTTGGCTGTCCGTGTAGAAGAATCAAGCAAGAATCCTGATTACTTAGCCATTAAATTTTTGTACCAAGGAGGTCAAACAGAGATAGTAGCCGTTGATGTGGCTCAGGCTGATTCTTCAAACTGGAGCTTCATGAGCAGAAACAACGGGGCAGTGTGGGACACAAACAGGGTACCCAAAGGAGCATTGCAGTTTCGGTTAGTGGTAACAGCAGGGTATGATGGGAAGTGGATTTGGGCAAAGAATGTCCTACCTTCTGATTGGAAAAATGGTGTCATATATGATTCTGGCCTTCAGATAACAGACATTGCACAAGAGGGTTGTTCCCCTTGTGATGATTCCATCTGGTCATGA 354 0.4435 NLAVRVEESSKNPDYLAIKFLYQGGQTEIVAVDVAQADSSNWSFMSRNNGAVWDTNRVPKGALQFRLVVTAGYDGKWIWAKNVLPSDWKNGVIYDSGLQITDIAQEGCSPCDDSIWS* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0253 117 Pfam Expansin C-terminal domain 3 85 IPR007117 -
Pvu11g0253 117 PANTHER EXPANSIN-B3 1 113 - -
Pvu11g0253 117 SUPERFAMILY PHL pollen allergen 1 96 IPR036749 -
Pvu11g0253 117 Gene3D - 1 101 IPR036749 -
Pvu11g0253 117 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 14 96 IPR007117 -
Pvu11g0253 117 PANTHER EXPANSIN-LIKE A1-RELATED 1 113 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0253 1 117 Expansin Gene Family AT4G38400 68.376 3.64e-59 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0253 - - pvu:PHAVU_011G0248001 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0253 11 2073568 2074021 Pvu11g0253 11 2073568 2074021 ECH