Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0252 ATGGCCACCATGGAAGACATCGCCATGAGTTCTGAAATTGCACTTCCAGGCTTCCGATTCCATCCCACGGAGGAAGAGCTTCTCGATTTCTACCTCAAGAACATGGTTGTTGGCAAGAAACTCCGTTACGACGTTATTGGTTTCCTCAACATCTATCACCACGATCCCTGGGACTTACCTGGTTTGGCTAAGGTTGGGGAGAGAGAATGGTACTTCTTCGTGCCGAGGGACAGGAAGCACGGAAGCGGGGGAAGGCCGAACCGGACCACCGAAAAAGGATTTTGGAAAGCCACCGGTTCGGACCGGAAAATAGTGACTTTGTCTGATCCCAAACGCATAATCGGGTTAAGGAAAACCCTGGTTTTCTACATGGGAAGAGCTCCCAGTGGACGCAAAACCGATTGGGTCATGAACGAGTACCGTCTACCTGACAATTGCAAATTACCCAAGGAAATAGTGTTGTGCAAGATATACAGAAAGGCAACATCGTTGAAAGTGCTGGAGGAAAGGGCAGAGAGAGAGATGAAGCAAATGGTGGGTTCCCCTGCTTCTCCTCCTTCTTCCACGGACACCATGTCCTTCAGCAGCCCACAGGAAGAGCAAAACGTGCCCTTGCCACTGCCCTTGTTGCAGAATGTTCTCAAGAAAGAGTCTGAATCTGAAGAAATGGCACCATGTGTTGCCAACATGACAGTGCCTAAACAAGAAAAAGGAAGCAACCAATTGGGTTTAAAGGACACCAGCAAGGGCAGTTGTGGGACATCATCCCTACAAATGCCCTTTGGGAAGGACAACCTTCCTGATCTGCAGCTTCCCATGCTAACAGATTGGACCCAAGATACCTTTTGGGCTCAGTTGAACAGTCCATGGCTCCAAAACTTTACTCCTTCCAACATCTTAAACTTCTACTGA 912 0.4868 MATMEDIAMSSEIALPGFRFHPTEEELLDFYLKNMVVGKKLRYDVIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDRKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYMGRAPSGRKTDWVMNEYRLPDNCKLPKEIVLCKIYRKATSLKVLEERAEREMKQMVGSPASPPSSTDTMSFSSPQEEQNVPLPLPLLQNVLKKESESEEMAPCVANMTVPKQEKGSNQLGLKDTSKGSCGTSSLQMPFGKDNLPDLQLPMLTDWTQDTFWAQLNSPWLQNFTPSNILNFY* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0252 303 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 5 302 - -
Pvu11g0252 303 MobiDBLite consensus disorder prediction 181 202 - -
Pvu11g0252 303 MobiDBLite consensus disorder prediction 173 202 - -
Pvu11g0252 303 SUPERFAMILY NAC domain 5 160 IPR036093 GO:0003677|GO:0006355
Pvu11g0252 303 Gene3D NAC domain 23 164 IPR036093 GO:0003677|GO:0006355
Pvu11g0252 303 ProSiteProfiles NAC domain profile. 14 160 IPR003441 GO:0003677|GO:0006355
Pvu11g0252 303 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Pvu11g0252 303 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0252 Pvu-Chr11 2054940 2056988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0252 9 303 NAC Transcription Factor Family AT2G17040 59.933 6.59e-118 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu11g0252 NAM 4.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0252 - - gmx:732555 514.998