Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0251 ATAAACCTTTCTGTCTCCTTTTATCTCTCTAAGATCATATTTCTCTCTCTAAAACACTTATTTTCTGACACACCATCTGCTCAAATTTCTTTGTCTTTCACTCTCACTTTTGTCACTTTTCCCCCAAAATTTTCCTCCAAACCTTTGATTCTCTCTCGCTCTCCACCGATCATGCTTCAAAGCTTGGTCCCGCGATCCCCCCGCACTTCCAACACTAACGACATGAAAACCAAGCGCACCGTTGACACCGTTGATTCTCCCGCCGATCAGCCTTCTTTCAAGCGGACCAACTTCGCCGCCGATACAGCCACCGAGGAAGAGCAGGCCTTCGATCCCCAACCTCACATCGAGTGTGTTGCCATGGATAAACTCGACTTCGCCAACGACTTGCTGCCGGAGATCGCCGAACTCTCGTCGCCGTTCGGGACCTCGCCGGAGCGCGTCGGAGCGTACTTCGCGCAGGCGCTGCAGGCGCGTGTGGTGAGCTCCTGCCTCGGCTCCTACTCTCCTCTGACCGCGAAATCGGTAACCCTAACTCAGTCGCAGCGAATCTTCAACGCCTTCCAATCCTACAACTCGGTCTCGCCGCTGGTGAAGTTCTCTCACTTCACCGCGAACCAGGCTATCTACCAGGCCCTGGAAGGCGAGGATCGCGTCCATATCATCGACCTCGATATCATGCAAGGTCTCCAATGGCCAGGACTGTTCCACATACTCGCCTCTCGCTCGAAGAAGATCCGCTCCATGAGGATTACCGGATTCGGATCCTCCTCTGAGCTCCTGGACTCCACCGGCCGGAGGCTCGCGGATTTCGCGAGCTCGCTCGGGCTGCCGTTCGAGTTTCATCCGGTGGAAGGGAAAATCGGAAGCGTGACGGAACTGAGTCAACTCGGCGTTCGAGCTAACGAGGCGATCGTGGTGCACTGGATGCATCATTGCTTGTATGACATAACCGGGAGCGATTTAGGGACGTTGAGATTGCTGACTCAGCTCAGGCCGAAGCTGATCACGACCGTGGAGCAGGACCTGAGCCACGCCGGGAGCTTCCTTGCGCGGTTCGTGGAGGCCTTGCATTATTACAGCGCGTTGTTCGACGCGCTCGGGGATGGTTTAGGTGCGGACAGCCTCGAGAGGCACACGGTGGAGCAGCAGCTTTTGGGCTGCGAGATCAGGAACATCGTGGCCGTGGGCGGGCCCAAGAGGACCGGAGAGGTTAAGTTGGAGCGGTGGGCGGATGAGTTGAAACGGGCCGGGTTTCGGGCCGTTTCCCTCCGGGGCAACCCTGCTGCACAAGCCAGTTTGTTGCTTGGAATGTTCCCTTGGAGAGGTTATACTCTTGTTGAAGAGAATGGTTCCTTGAAGCTTGGTTGGAAGGACCTCTCTCTCTTGATTGCCTCTGCTTGGCAACCCTCTGATTCCATTACTTACCCTGATTGA 1437 0.556 INLSVSFYLSKIIFLSLKHLFSDTPSAQISLSFTLTFVTFPPKFSSKPLILSRSPPIMLQSLVPRSPRTSNTNDMKTKRTVDTVDSPADQPSFKRTNFAADTATEEEQAFDPQPHIECVAMDKLDFANDLLPEIAELSSPFGTSPERVGAYFAQALQARVVSSCLGSYSPLTAKSVTLTQSQRIFNAFQSYNSVSPLVKFSHFTANQAIYQALEGEDRVHIIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSSELLDSTGRRLADFASSLGLPFEFHPVEGKIGSVTELSQLGVRANEAIVVHWMHHCLYDITGSDLGTLRLLTQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLGADSLERHTVEQQLLGCEIRNIVAVGGPKRTGEVKLERWADELKRAGFRAVSLRGNPAAQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLIASAWQPSDSITYPD* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0251 478 Pfam GRAS domain family 117 469 IPR005202 -
Pvu11g0251 478 PANTHER SCARECROW-LIKE PROTEIN 23 117 470 - -
Pvu11g0251 478 ProSiteProfiles GRAS family profile. 96 469 IPR005202 -
Pvu11g0251 478 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 117 470 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0251 Pvu-Chr11 2045096 2046580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0251 75 472 GRAS Transcription Factor Family AT5G41920 65.366 1.26e-180 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu11g0251 GRAS 8.9e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0251 - - pvu:PHAVU_011G024600g 945.266