Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0236 ATGGAGATTGAGGCTGCAGCCACCGATCGCAGCAAACCCTCCAACTGGGGTGCTGCTGCTGCTGAGACTGATAGGGATGTGCCCTACACGGGCCTTGACAGAGGGAGCTTCTTGGCTTGGCAAGATCTCAGAGTGGTGCTACCAAACTTTGGAAAAGGACCCACCAAGAGACTGCTTAATGGTCTCAATGGCTATGCTGAGCCTGGCAGAATCATGGCTATAATGGGTCCTTCTGGTTCTGGAAAATCCACCCTTCTTGATTCACTTGCAGGTAGACTCTCAAAAAATGTGGTTATGACAGGAAATGTTCTTCTAAATGGGAAGAAAAAAGGCCTGGGTTACGGTGGTGTTGCTTATGTAACTCAAGAGGATGTGCTTCTGGGAACCCTTACAGTGAAGGAAACTGTATCCTACTCGGCTCATCTTCGTCTTCCAACATCAATGAGCAAAGAAGAAGTTAACAGCCTCATCGATGGAACAATCATAGAAATGGGTCTGCAAGATTGTGCTGATAGGTTGATTGGTAACTGGCACTTGAGAGGTATAAGTGGAGGGGAGAAGAAGAGGCTCAGCATTGCACTTGAGATCCTTACAATGCCTCGCTTACTGTTCCTTGATGAACCCACCAGTGGCCTTGACAGTGCCTCAGCATTTTTTGTTGTTCAAACTCTCAGAAATGTTGCTCGTGATGGAAGAACTGTTATCTCTTCCATTCACCAGCCCAGCAGTGAAGTCTTTGCACTCTTTGATGACCTTTTCTTGCTATCTGGCGGTGAAACAGTTTATTTTGGAGAAGCAAAATCAGCAATTGAGTTTTTTGCTGAAGCTGGTTTCCCTTGTCCACGCAAAAGAAATCCTTCTGATCACTTCCTACGATGCATCAATTCTGATTTCGACATTGTTACAGCTACTCTGAAGGGATCTCAGAGAATTCATGATATTCCAAATTCAGCAGATCCTTTCGTGAATTTGGCTACAGCAGAGATCAAGTCAATGCTAGTGGAGAAATATAGGCGTTCAACACATGCCAGAAGGGCAAAGACCAGAATTCAACAACTATCTACAGATGAAGGGCTTCAACCTTCTACACAACATGGAAGTGAAGCTAGTTGGTGGAAGCAACTCACAACTCTGACAAAGAGATCATTTGTGAACATGTGCAGAGATGTGGGGTACTACTGGTTGAGGATCATAATTTACATAATTGTTTCCATATGTGTGGGAACAGTTTATTTTGACATTGGCTATAGCTACACTTCCATCTTGGCCCGTGGTGCCTGTGGTGCATTCATATCAGGATTTATGACATTCATGTCAATTGGGGGCTTTCCATCATTCATTGAAGAAATGAAGGTATTTTATCGAGAAAGGCTTAATGGATACTATGGAGTTGCAGCATATATTTTATCCAACTTCCTTTCTTCTTTCCCATTCTTGGTTGCTATTGCTCTTACATCTAGCACCATCACCTATAACATGGTGAAATTCAGGCCAGGGATCAGTCACTTTGTGTTTTTCACCATCAACATCTACAGCTGCATTTCTGTAATAGAGAGCCTCATGATGGTTGTGGCTTCACTTGTTCCAAATTTCCTCATGGGAATAATCACAGGGGCTGGAATAATAGGAATCATGATGATGACCTCTGGATTCTTCAGGTTGCTGTCTGATCTTCCAAAGCCAGTTTGGCGCTACCCCATTTCATATATCAGTTATGGTTCATGGGCAATACAGGGTGCCTACAAGAATGACTTGCTTGGGCTTGAGTTTGAACCTCTGATACCTGGTGATCCAAAATTGAATGGAGAATATGTGATCACACACATGTTAGGCATTGAATTAAACCATTCAAAGTGGTGGGATTTGGCAGCTCTATTTGTGATTCTGATAGGTTACAGACTTCTGTTCTTCGTTGTTCTGAAGTTGAAGGAGAGAGCATCACCACTGTTTCAGACACTTTATGCCAAGAGAACCATTCAACAGCTTGAAAAGAGACCCTCTTTCAGGAAGATGCCATCCTTCCCTTCCCAGAGGCACCAAACCCTCCATTCACTTTCTTCTCAAGATGGTCTTGAATCTCCACTCCAATAA 2091 0.4347 MEIEAAATDRSKPSNWGAAAAETDRDVPYTGLDRGSFLAWQDLRVVLPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNVLLNGKKKGLGYGGVAYVTQEDVLLGTLTVKETVSYSAHLRLPTSMSKEEVNSLIDGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTMPRLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKSAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDIVTATLKGSQRIHDIPNSADPFVNLATAEIKSMLVEKYRRSTHARRAKTRIQQLSTDEGLQPSTQHGSEASWWKQLTTLTKRSFVNMCRDVGYYWLRIIIYIIVSICVGTVYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYILSNFLSSFPFLVAIALTSSTITYNMVKFRPGISHFVFFTINIYSCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGSWAIQGAYKNDLLGLEFEPLIPGDPKLNGEYVITHMLGIELNHSKWWDLAALFVILIGYRLLFFVVLKLKERASPLFQTLYAKRTIQQLEKRPSFRKMPSFPSQRHQTLHSLSSQDGLESPLQ* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0236 696 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 274 IPR027417 -
Pvu11g0236 696 CDD ABCG_EPDR 35 264 - -
Pvu11g0236 696 Pfam ABC-2 type transporter 239 296 IPR043926 GO:0140359
Pvu11g0236 696 MobiDBLite consensus disorder prediction 1 20 - -
Pvu11g0236 696 ProSitePatterns ABC transporters family signature. 182 196 IPR017871 GO:0005524
Pvu11g0236 696 Pfam ABC transporter 59 210 IPR003439 GO:0005524
Pvu11g0236 696 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 38 282 IPR003439 GO:0005524
Pvu11g0236 696 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 35 691 - -
Pvu11g0236 696 SMART AAA_5 68 239 IPR003593 -
Pvu11g0236 696 Pfam ABC-2 type transporter 374 583 IPR013525 GO:0016020|GO:0140359
Pvu11g0236 696 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 35 691 - -
Pvu11g0236 696 MobiDBLite consensus disorder prediction 670 696 - -
Pvu11g0236 696 MobiDBLite consensus disorder prediction 673 696 - -
Pvu11g0236 696 Gene3D - 39 276 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0236 Pvu-Chr11 1826537 1832771 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0236 54 251 Calmodulin-binding Proteins AT2G36910 31.100 1.42e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0236 K05681 - gmx:100807692 1244.57