Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0207 ATGTCAGAAAGAGCTGAACCTGAAACACCCCAAACACACATTTTCAGATCAAAATTACCAGACATACCCCTCCCCAACAACCTCCTTCTCCACACATACTGCTTCCTTAAACTTCCCCAAGTTTCCCACCGTACGTGCCTTATCGCCGCCGCCAGAACCTATACCTACGCCGAAACTCACAGCGCCTCCCGGAAGGTGGCCGCCGGCATGTCGAAGCTGGGCATCCAGAAGGGCGACGCCGTCATGATTCTCCTCCCTAACTCCCCGGAGTTCGTGTTCTCCTTCATGGCAGCCTCCATGCTCGGCGCCGTGGCCACAACCGCCAACCCCTCCTACACCGCCGCCGAAATCGCCAAGCAACTCGCCGCCTCCAACGCCAAGCTGGTCGTCACCCTCTCCGAGAACGTCCCCAAGCTCCACCAGCAAGAGCGCCAACACTTCTTCAAGGTGGTCACCGTCGACGACCCGCCGGAGAATTGCACGAGGTTCCCGGAGGGCGACGAGAGCGGGGTTCCGGAGGTCGAGATATCGGCGGAGGACGCGGTGGCGCTGCCGTTTTCGTCGGGGACGACGGGGCTAGCGAAGGGGGTGATTCTGACGCACAAGAGTTTGGTAACGAGCGTGGCGCAACAGATGGAGGGAGAGAACCCGAACATGTACCTGAAAGAAGAGGACGTTGTGTTGTGCGTGCTTCCTCTTTTTCACATATTCTCCATGCACATCGCCATGATGTGCGCGCTGAGAGCGGGGAGTGCCATTTTGTTGATCGAGAAGTTTGAGATGAGGAAGCTGCTGGAGGCGATTGAGCGGCAAAGGGTCACGGTGGCGATAGTGGTGCCGCCGCTGGTGGCCGCACTTACGAAGAACAGTACGGTGGAGGAGTATGATTTGAGGTCGATACGATTGGTGATATCGGGGGCTGCGCCGCTGGGGCAACAGGCGGAGGAAGCTCTCCGGAAAAGGTTGCCTAACGCCATTCTGGGACAGGGCTATGGAATGACAGAGGGTGGACCAGTTTTGACTATGTCTCTGGGCTTTGCAAAGTATCCATTCCCAACGAAATCTGGTTCATGCGGAACTGTGATCAGAAATGGTGAACTGAAGATCATTGACCCTCTAACATCCTTTTCTCTTCCCCGTAACCACTCTGGGGAGATTTGCGTCCGTGGGCCACAGATCATGAAAGGGTACCTGAATGACGAGGAGGCCACTGCAGCCGCCATTGATGGAGATGGTTGGCTTCACACAGGTGATATTGGGTACGTGGATGATGATGATGAGGTTTTCCTCGTTGACAGGGCCAAGGAACTCATCAAATTCAAAGGCTTTCAGGTGCCGCCGGCAGAACTTGAAGACCTTCTCATGCGCCACCCTTCCATTGCAGATGCAGCTGTCGTCCCGCAGAATGACGATGCCGCCGGTGAAGTTCCGGTCGCTTTTGTCGTGAGCTTTGATCTTACAGAAGATGCTGTAAAGGATTTTATAGCTAAACAGGTGGTGTTTTACAAGAGACTGCACAAAGTGTATTTTGTTGACGAGATTCCAAAGTCTTCCACTGGAAAGATATTAAGAAAAGAACTGAGAGCAAAGGTGGGGAGCATTATTCAGAGGACCTAG 1617 0.5436 MSERAEPETPQTHIFRSKLPDIPLPNNLLLHTYCFLKLPQVSHRTCLIAAARTYTYAETHSASRKVAAGMSKLGIQKGDAVMILLPNSPEFVFSFMAASMLGAVATTANPSYTAAEIAKQLAASNAKLVVTLSENVPKLHQQERQHFFKVVTVDDPPENCTRFPEGDESGVPEVEISAEDAVALPFSSGTTGLAKGVILTHKSLVTSVAQQMEGENPNMYLKEEDVVLCVLPLFHIFSMHIAMMCALRAGSAILLIEKFEMRKLLEAIERQRVTVAIVVPPLVAALTKNSTVEEYDLRSIRLVISGAAPLGQQAEEALRKRLPNAILGQGYGMTEGGPVLTMSLGFAKYPFPTKSGSCGTVIRNGELKIIDPLTSFSLPRNHSGEICVRGPQIMKGYLNDEEATAAAIDGDGWLHTGDIGYVDDDDEVFLVDRAKELIKFKGFQVPPAELEDLLMRHPSIADAAVVPQNDDAAGEVPVAFVVSFDLTEDAVKDFIAKQVVFYKRLHKVYFVDEIPKSSTGKILRKELRAKVGSIIQRT* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0207 538 Gene3D - 434 533 IPR045851 -
Pvu11g0207 538 Pfam AMP-binding enzyme 43 440 IPR000873 -
Pvu11g0207 538 Gene3D - 6 433 IPR042099 -
Pvu11g0207 538 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 530 - -
Pvu11g0207 538 CDD 4CL 24 527 - -
Pvu11g0207 538 PANTHER 4-COUMARATE--COA LIGASE 3 13 530 - -
Pvu11g0207 538 SUPERFAMILY Acetyl-CoA synthetase-like 21 533 - -
Pvu11g0207 538 Pfam AMP-binding enzyme C-terminal domain 449 521 IPR025110 -
Pvu11g0207 538 ProSitePatterns Putative AMP-binding domain signature. 184 195 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0207 Pvu-Chr11 1586744 1589607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0207 14 466 Monolignol Biosynthesis Gene Families AT3G21240 60.521 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0207 K01904 - gmx:100790396 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0207 11 1586744 1589607 Pvu11g0207 11 1586744 1589607 ECH