Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0191 ATGAGAGATATTTGTCGAAACTTCCAGCGAGGCAGTTGTCAATATGGAGAAAGGTGTAGATATTCACACGTCACCCAACAGAGAAAACCTAACGATCAAGGGTTTGGCGGACAAAACGGTTCTCACCAACAGCGAAGTACAAATCCCTTCGGATTTGGGTCTGGTTCTGGTTCACAACAACAACAACAGAAGTCTAAGCCTTTTGGTTTTGGCGCGCAGAACAGCTCCCAGTTAAACGGGGGGCCTCGTCCTGAGTATAAACCGAACCAATACAAGCCTTTTGAAAACAAATGGAATCGACAGCCGTCCAAACCCCAGAATGGTGTGAAATCTGATAACAACCCCCAACCAGTCGAGCATAGATGCACAGATCCTGACAACTGCAAGCGCCAGATTGCAGAAGATTTCGAGAAAGAGAAACCAATTTGGATACTTACATGCTACAGTCATTGCAAAGGTGCTCCATGTGACATTGTTGGTGATATTAGCTATGAAGAATTGCGAGCATCAGCTTACGAGGATGCAAAGCGTGGGATGAGCTTGCAATCAATAGTTGAGAAAGAGAGAAATATACTGAAATCCAAGATGCTTGAGTTTGAGAAACTACTTTCTGAACCTTACCAAAAACCAGTAAGTTCTTCTCTTGACAGTCAAAGACCCCAATCCATTGGAGCCAATGCAAATCAGTTTTCAGGAACTTCTCAAAGTAATGGTCCTTTGTCAGTCTCAAGCTTTAGCCAACTTGGTTCTTCAATGAATATGGGTTTTGGAAGGCCATCTGCACCACCAACAAACACTCTGGCACAGCCTAGTTTCTTTGGAGTTGGAGTAACCAGTGGCAACTTCGGTGTTCAAAGCAACCCCCATTCTACACAAGTGGATTTGACAATGTTTCCGGGTTCAACTCAGCCAACATCAACCACATTCAATAACTCTGGTCCCAATACAATGTTTCAAACAACATCGGATGTCCAGCTGTCAAACAAGTTACAAGCGGAGAATGTGTCAGGAGATATCAGTATTTGGTTAAAAGATAAATGGAATCCGGGAGAGATCCCAGAAGAAGCTCCTCCTGATTCATTGGTACGGTAG 1092 0.4386 MRDICRNFQRGSCQYGERCRYSHVTQQRKPNDQGFGGQNGSHQQRSTNPFGFGSGSGSQQQQQKSKPFGFGAQNSSQLNGGPRPEYKPNQYKPFENKWNRQPSKPQNGVKSDNNPQPVEHRCTDPDNCKRQIAEDFEKEKPIWILTCYSHCKGAPCDIVGDISYEELRASAYEDAKRGMSLQSIVEKERNILKSKMLEFEKLLSEPYQKPVSSSLDSQRPQSIGANANQFSGTSQSNGPLSVSSFSQLGSSMNMGFGRPSAPPTNTLAQPSFFGVGVTSGNFGVQSNPHSTQVDLTMFPGSTQPTSTTFNNSGPNTMFQTTSDVQLSNKLQAENVSGDISIWLKDKWNPGEIPEEAPPDSLVR* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0191 363 MobiDBLite consensus disorder prediction 94 116 - -
Pvu11g0191 363 ProSiteProfiles Zinc finger C3H1-type profile. 4 26 IPR000571 GO:0046872
Pvu11g0191 363 MobiDBLite consensus disorder prediction 24 125 - -
Pvu11g0191 363 MobiDBLite consensus disorder prediction 208 244 - -
Pvu11g0191 363 PANTHER MAKORIN-RELATED 2 361 IPR045072 -
Pvu11g0191 363 SMART c3hfinal6 1 25 IPR000571 GO:0046872
Pvu11g0191 363 Pfam CCCH-type zinc finger 4 23 IPR041367 -
Pvu11g0191 363 SUPERFAMILY CCCH zinc finger 3 27 IPR036855 GO:0046872
Pvu11g0191 363 Gene3D - 1 77 - -
Pvu11g0191 363 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 16 2 361 - -
Pvu11g0191 363 MobiDBLite consensus disorder prediction 26 83 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pvu11g0191 zf-CCCH_4 4.1e-08 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0191 K14321 - gmx:100814339 550.821