Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0190 ATGAGAGGTTTCAATGAAGAACATGGTGTTGTGGGGGGAAAGGAAGGAGAGAACATGTGGCCTTCATGGCTGCGGCCACTTCTCAAGACGAGTTTTTTTGTCCAATGCAAAGTCCACGCAGATTCCCACAAGAATGAATGCAATATGTATTGCTTGGACTGTGTGAATGGAGCTCTTTGCTCTGCATGTCTTGCTTCCCATAAAGAACACAGAACAATCCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTATCTGAGATACAGAAATTTCTGGACATAACAGCCGTCCAAACTTACATTATTAACAGTGCCAAGATTGTGTTCTTGAATGAAAGGCCCCAACCAAGGCCTGGAAAAGGTGTCACCAATACCTGCCAAGTCTGTGACCGCAGCCTCCTTGATTCCTTCAGCTTCTGCTCTCTTGGTTGTAAGATTGTTGGAACCTCCAAAAAGTTCCGGAAGAAGAAAATGTTAGGTGAGACAGATGGGTCTGATGGTGAAGAATCAGTGAACGGCATAAGCAATGTAAATGCTAGAAACAAAATCCATAGCTTTACACCTTCAACACCACCACCAACAGTGGCTAATTACAGAACTGCCAAGAGAAGGAAAGGAATTCCACATAGAGCTCCAATGGGTGGAGGGCTCATTATAGAATACAATGTTGTATAG 678 0.4366 MRGFNEEHGVVGGKEGENMWPSWLRPLLKTSFFVQCKVHADSHKNECNMYCLDCVNGALCSACLASHKEHRTIQIRRSSYHDVIRVSEIQKFLDITAVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCDRSLLDSFSFCSLGCKIVGTSKKFRKKKMLGETDGSDGEESVNGISNVNARNKIHSFTPSTPPPTVANYRTAKRRKGIPHRAPMGGGLIIEYNVV* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0190 225 Pfam PLATZ transcription factor 76 147 IPR006734 -
Pvu11g0190 225 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 12 217 - -
Pvu11g0190 225 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 12 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0190 Pvu-Chr11 1482496 1484957 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pvu11g0190 PLATZ 5.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0190 - - gmx:100810757 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0190 11 1482496 1484957 Pvu2g0428 2 3950798 3953185 ECH
Pvu11g0190 11 1482496 1484957 Pvu11g0190 11 1482496 1484957 ECH