Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0186 ATGGCTGCTGCTGACAACACCAACCCTCCTAAGGACTATTACAAAGTGCTGGAGGTTGATTATGATGCAACTGATGAAAATATTAAATTAAATTACCGAAGACTCGCGTTGAAATGGCATCCTGACAAGCACGGAGGTGACAGTGATGTTACTGCAAAATTTCAAGAGATAAATGAAGCTTACAATGTATTAAGTGATCCTGCCAAGCGTTTTGACTATGATTTAACGGGTATATGCGAGATTGAAAAATATAGTTTACAGGAATATCTTGCCAGATTTAAAGGCATGATTCTTACCTGCAATGGCCTTGGTATCGATCAAACAGACAGATGGTCACCGCAATTGATTGAAAATTTTGAATCCCTAGATAAATAA 375 0.3787 MAAADNTNPPKDYYKVLEVDYDATDENIKLNYRRLALKWHPDKHGGDSDVTAKFQEINEAYNVLSDPAKRFDYDLTGICEIEKYSLQEYLARFKGMILTCNGLGIDQTDRWSPQLIENFESLDK* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0186 124 CDD DnaJ 12 66 IPR001623 -
Pvu11g0186 124 Pfam DnaJ domain 12 74 IPR001623 -
Pvu11g0186 124 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 116 - -
Pvu11g0186 124 SUPERFAMILY Chaperone J-domain 9 97 IPR036869 -
Pvu11g0186 124 PANTHER DNAJ PROTEIN-LIKE 4 116 - -
Pvu11g0186 124 PRINTS DnaJ domain signature 14 32 IPR001623 -
Pvu11g0186 124 PRINTS DnaJ domain signature 32 47 IPR001623 -
Pvu11g0186 124 PRINTS DnaJ domain signature 49 69 IPR001623 -
Pvu11g0186 124 ProSiteProfiles dnaJ domain profile. 12 77 IPR001623 -
Pvu11g0186 124 SMART dnaj_3 11 69 IPR001623 -
Pvu11g0186 124 Gene3D DnaJ domain 2 93 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0186 Pvu-Chr11 1452616 1456600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0186 3 74 C2H2 Transcription Factor Family AT1G74250 40.260 4.81e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0186 - - gmx:100305987 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0186 11 1452616 1456600 Pvu11g0186 11 1452616 1456600 ECH