Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0185 ATGTCAACAACCTCGCAGGTTATTACATGCAAAGCTGCAATATGCTGGGGATTAGGACAACCTGTTACAGTGGAAGAGATTCAAGTTGATCCACCAAAAGCAACTGAAGTTCGAGTTAAGGTGCTCTGTGCAAGTATCTGCCACACAGACCTAACAAGCCTTCAAGGATTCCCACATATGTGTTTTCCTCTAGCACTTGGACATGAAGGAGTTGGTGTTGTAGAGAGTGTTGGTGATGAAGTGACAACCCTTAAAGAGGGGGATGTAGTGATCCCAACATACATAGGGGAGTGTGAAACATGTGAGAATTGTGTTTCTGGGAAAACAAATTTATGTCTAACACACCCTGTGAGGTTGAATGGTTTGCTACCAGACAACACTTCAAGGATGTCCATAAGAGGACAGAGATTATACCATGTTTTAAGCTGTGCTACATGGTCAGAATACTTTGTTAGTGATGTGAATTACACTGTCAAAGTTGATTCAGCCATTGACCCAGCACATGCAAGTTTCATCTCATGTGGGTTTTCAACTGGGTTTGGAGCAGCTTGGAAGGAAGCCAAGGTCGAAAGTGGATCCAGTGTAGCTGTTCTTGGTCTTGGGGCTGTTGGATTAGGGGCTATAAGTGGAGCCAAAAGTATGGGAGCAAGTAAGATAATTGGAATTGACAAAAATGAAAAGAAGAGGGAAAAAGGAGAGGCTTTTGGAATGACCCAGTTCATAAATCCTGGTGATTCTGCTAAATCTGTTTCAGAATTGGTAAAGGAAGTAACTGGTGGAATGGGTGTGGATTACTCCTTCGAGTGCACTGGAATTCCCCCTTTGCTTTCTCAATCATTGGAAGCCACAAAAATGGGAACGGGTAAAACAGTAGTAGTTGGAATACCAGCAGAACCTACTGTGTCCTTGGGTATGCTATCCCTTCTTCTCGGTAGAACTATGAAAGGTTCAGCTTTTGGAGGTCTAAAAGTTAGATCTGATATTGCCATAGTAGCTAACAAATGCCTCAAAAAGGAATTCCCTCTTGATGAACTATCCACTCATGTGGTCCCATTAGAAGATATTAGCAAAGGATTTGAGATATTGAAAGATCCCAACTGTGTAAAAGTTGTGATCAAGATATCTCATTGA 1131 0.42 MSTTSQVITCKAAICWGLGQPVTVEEIQVDPPKATEVRVKVLCASICHTDLTSLQGFPHMCFPLALGHEGVGVVESVGDEVTTLKEGDVVIPTYIGECETCENCVSGKTNLCLTHPVRLNGLLPDNTSRMSIRGQRLYHVLSCATWSEYFVSDVNYTVKVDSAIDPAHASFISCGFSTGFGAAWKEAKVESGSSVAVLGLGAVGLGAISGAKSMGASKIIGIDKNEKKREKGEAFGMTQFINPGDSAKSVSELVKEVTGGMGVDYSFECTGIPPLLSQSLEATKMGTGKTVVVGIPAEPTVSLGMLSLLLGRTMKGSAFGGLKVRSDIAIVANKCLKKEFPLDELSTHVVPLEDISKGFEILKDPNCVKVVIKISH* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0185 376 PANTHER ALCOHOL DEHYDROGENASE 5 373 - -
Pvu11g0185 376 Gene3D - 179 317 - -
Pvu11g0185 376 SMART PKS_ER_names_mod 17 372 IPR020843 GO:0016491
Pvu11g0185 376 PANTHER ALCOHOL DEHYDROGENASE-RELATED 5 373 - -
Pvu11g0185 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 335 IPR036291 -
Pvu11g0185 376 Gene3D - 14 369 - -
Pvu11g0185 376 SUPERFAMILY GroES-like 3 190 IPR011032 -
Pvu11g0185 376 CDD liver_alcohol_DH_like 8 373 - -
Pvu11g0185 376 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Pvu11g0185 376 Pfam Zinc-binding dehydrogenase 202 321 IPR013149 -
Pvu11g0185 376 Pfam Alcohol dehydrogenase GroES-like domain 35 158 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0185 Pvu-Chr11 1441984 1445057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0185 35 323 Monolignol Biosynthesis Gene Families AT2G21730 30.169 3.20e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0185 K00121 - gmx:100798341 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0185 11 1441984 1445057 Pvu11g0185 11 1441984 1445057 ECH