Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0184 ATGGTATCACTCAAATCTGGAAAGAAATTTGACGAACATTCTATGATTCAGAAAGCTGAAATGAGACTCGAATCAGGGACTTGTAATGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCGAGCTCTCATGGGGTCAAAGACCAAAGAATTCTCTGATGAAAACTCTCGCTTAGGAGAGGCTAATCAGTATTGTACTGTTGAGGCTGATGGGTCTTCTTCTCCTGGGAGCAGAGCTTGTGAAAGATTGAAGAAGCATCCTGTCAATGAAAGCAGTCACAAGCCTAGTATTTCTTCAACTCATGATTCTCAGTCTGAAAATGTTGAGAATGGACAAGCCTTATCTGGGAAGTATCAGGATTCTAAGTGTTTAGAAAGTCTTGACGATATCACTTCTTGTATCAGTAGGACCAGTGATGCTAATTTAGCGAGTGGTAGCCAACAAATAAATACAGACAGAATAAATGTATCTTGTAGTTCGACTTTAGTTAGTCACTTAGAGGCAGAAAGATCTAGAAATGGGCCATCTGTTGACATGTCTGGTTTGTCAGAAGGCTGTATGGAAAATGTAGATTCATCATTTACCAAAGAGAGAGTACCTATTATATCTGCTGGTGAAAAACCTGTGGCAGATAAGGAGAACCTAAATAATGGTATAGCCAAAGTTTCAGTGGAAATATGTCCGAAGTCAGAAGCAGATATGGGAAATAATGTTGATATTGCTATAGCTGAAGATCATAAATATTCAGCCCTTGATGGACTGCATGCGAAGGTTGATAAGCTGATTAAATCATCTGGCAGGTCTGAACCTCTATCAGAAGATGAGGGTCATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAAGATCTACTTGCCATATGTAGTAGGTGTAGTGATGGTGCAGAGCACACCTACTGCATGCGGGAAATGCTTGTCAAACTCCCTGAAGGTGATTGGTTGTGTGAAGAATGCAAGTGTGTGGAGGAGACGGCAAATCGAAGGCTAGCTTCACAAATTTCTGGCAAAAGACCTTCTCAAAGCATGGAAATAGCTACAGCAGCAAAAAGGCAAGCTCTTGAATCAAGCACAGGATCACCGAAGGCATCAAGCCCAAAGAGAATAGTCTCACTGTCACGGGAATCTTCTCTCAAGAGCATGGATAAAGGAAAGATGAAATCTGGGCAACAGGTCCCTGTGCGTAACCACCATGGTGGTGATGATGTAGACCTTGCACGTTCTCTTTCGACTGGCCCTCGGAGTCAAAATCCAAGGAGTACGTTGTTGAAGTCCAATTCATTCAACAACTTCAATTCCAAGCCTAGAATCAAACTTGTCGATGAAGTTGTTCCCCAAAAGCAGAAAGGGGGTGTCGAACATATTTCTAAGAATCTTGAGAAACCTACTGGGATGATAAGCAAATCAATGTCATTTAAATCCTCACACTTGGGGCGGTCAAATACTAATGAATCAAAAGTTAAATCTAGTTTTTCTAAACATGGAATTGTTCAGGATTCGAAAGCATTAAGACATACAAAAGAACTGGGTTCACTTGACAAGAAATTTCAACCTAAGATTGATCGACCTGTCATTCATTCAACTATGGTTAGTTCTGTTTCCACATCAAAAGGTGATCATAAGCTTGCTCCTCTTGGTGAAACTGCTAAACCTTATACAGTTAACAACAATCGAGAGTTTAAGGTCAACCAAGATGGAAAAGTATATTCATTATCAAAGTCTATGAGTAATACAGGCAGTAGAAGTCCAGAACCTCAAGTTAGTTCAGATAAAACATCAACCAGTGTCAATGAAACTCAACAGGATAGGCTGCCTCGATCACATGAAACTGTTAATCATGTTGACAGAACAAAGGATAGTTCTAGTGATCATGTGAGGTCAGGTGTTACTAATGCTTCAAAAAGTTCATTTTGTCGTAAATGTAAAGATTTTGGCCATGCTACAGAATGTTGCTCAATTAGTGGTACCCAAGAATTTGTTGCTGAAGCATCAGTCACTGCTACAAGTAGTTCAAAAGAGGAGATGCATAAGGGAAATAGATTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGGAGGCCTGAAATACACAAGAAGAAAGAAGGTCCTGATGAAACTAATGAGTTTCCTACATCAATCATAGGTTTCAAACGTGAAGTCACTTCTCAAAACCAAGTGTTGGTTTCCAGCACATTAAAGAATAGTATATATGCTGAAGAAACGAATGTGAAGCAGGAAATTGTTGAGAGTTCTTCATTTGAAACCACTAAATGTCCATCTGCTAATGATCCGAAGCAACTTAAATTTTTCCAAACTGATATTTGCTCTCAGCTGAGAAAGTCGGATTTTGTTGGTCTTACTTCTGGAGAGCCGGTAGTGAGAGACTTGGCCAATAATGGCATGGTGCTCTCAAGTGTTCTTTCAAAGATGTCAGTCATTCCGGAGTATGAGTACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCGCCTCCTGACTTGTATGCTGGAATTCAGGCACATTTATCTGCATGTGCTTCTCCTAAGGTTATTGAGACAGTAAGGAATTTTTCACCTGAAGTTTCCCTAAATGAAGTTTCTCGATTGAGCATATGGCCTTCACAATTTCATCAAAGTGGTGCTAAGGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACACTGAAAGTTACGAGAGACACTACAAGGGTCTGTTGGATCACATGATTAGAAATGATTTGGCACTTAGGGGAATGTTTGGTGGCGTTGAACTTCTCATATTTGCATCCAATCAGCTTCCGGAAGACTCACAGCGTTGGAATATGTTATTTTTCCTATGGGGTACATTTAGAGGGAGGAGGATAAATCATTCAAATTCCACAAAAAGTAAATGTATTCCTAGTTTGAATGTGATGCCAAATGAGAAGGATTTCCCGTCTGCTGTCATGACTTTGTCTGAAACTTGGTGTTCACCAAAACGTGTCAACGAAGAGTCCATTGACCAAGGTAACAATATGCCATGTAGGAATTTTGTTAGTAAAGGAACTGTGTTTGGCCAGACACATTTGGAGTTGCAAGTGAAGTTAGAGACACCAGATTCTAGTGTCAACACCAAATCTACATCAGGGATTCTGATCACCAGTACTCAATTGTGTCAAGAAATGAATTCTACTGGTTCATCCCTGGGAGATAGTGCACCAGAGCATCGACAATGCATACAGTCTAAACCTCCTGAAGTAACGGGAACTAGTGTAAGTAGAAGGATTGTGGAAACAAAAACTAATCCTGATATTTCTGGTAAGCAAGAGCCCTCTTCGTCTTTGGAGATCCCTTCTGTCGATTGCCAAATAGATACTGCAAGTAATATCATTAAGGATAAAATTTTGGAGAGAACAGTATACGATGAGAATCAGCGAAGGCCTAAAAGGAAACAGTTGGAAAATGATCTCAATATTAACGAGGAGGCAACAATGCTTCAGGGAGACCTGGATTTGAAAGGGGCCAACTGTCTGGTACCTAATGATAAAAAAATTAAGCATATAGATCTATCAGATACACTTGTGGAGGCTTCTGCAGTTAGTTCTCAGAAACGTCCTTTGAATGTGGTAAATTGCAAATTGGAAGACACAGAAAGTAGCAAGAAGCTGCAAAAAAGTTTGGGTGGAGTTTTTGAATGCAACGAATCTGCTGGAGCCAGGGTCTCTTTCAATGGTAGTTTTGCATCCCTTGTGAACGATCTTGGTTCCTGTTCTTCGGTGGGCAAAGGGTGCAAAGAAGCTTGCGATGAGAAAATCATCCACGAGGACTTAGGAACGATGGAAAGAACCTTTTTTCCTGTTGATAATCGCAATAAACTTAACTCGGGGATGGTGGTGAACAGGGAGTCACTGAATGGGGCTGGTGAGTACGTGGACCAATTTGAAGTTGGGATTCCAAATTTGGAGCTTGCTTTGGGGGGTGAAACAAAACCGTCACACAAGAGTATGCTGCCATTCTTTGTTGGTGCAGTTGACAAGAAAATTAACCCGGAAAAGACTCCAGATATTGAGCGAGACGATGAGAACGTTGCTGCATCTCTTTCCTTGTCACTATCCTTTCCATCTTCAAGCAAAGAACATATGAAACCAGTTACAAAAAATGAGCCTTTGCCCACCGATGGGCATAACGCCAAGTCGTCGTTTCTTCTTTTTGGGAGATTCACCGACAAATAA 4266 0.4079 MVSLKSGKKFDEHSMIQKAEMRLESGTCNVCSAPCSSCMHLNRALMGSKTKEFSDENSRLGEANQYCTVEADGSSSPGSRACERLKKHPVNESSHKPSISSTHDSQSENVENGQALSGKYQDSKCLESLDDITSCISRTSDANLASGSQQINTDRINVSCSSTLVSHLEAERSRNGPSVDMSGLSEGCMENVDSSFTKERVPIISAGEKPVADKENLNNGIAKVSVEICPKSEADMGNNVDIAIAEDHKYSALDGLHAKVDKLIKSSGRSEPLSEDEGHESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLVKLPEGDWLCEECKCVEETANRRLASQISGKRPSQSMEIATAAKRQALESSTGSPKASSPKRIVSLSRESSLKSMDKGKMKSGQQVPVRNHHGGDDVDLARSLSTGPRSQNPRSTLLKSNSFNNFNSKPRIKLVDEVVPQKQKGGVEHISKNLEKPTGMISKSMSFKSSHLGRSNTNESKVKSSFSKHGIVQDSKALRHTKELGSLDKKFQPKIDRPVIHSTMVSSVSTSKGDHKLAPLGETAKPYTVNNNREFKVNQDGKVYSLSKSMSNTGSRSPEPQVSSDKTSTSVNETQQDRLPRSHETVNHVDRTKDSSSDHVRSGVTNASKSSFCRKCKDFGHATECCSISGTQEFVAEASVTATSSSKEEMHKGNRLKAAIQAALLRRPEIHKKKEGPDETNEFPTSIIGFKREVTSQNQVLVSSTLKNSIYAEETNVKQEIVESSSFETTKCPSANDPKQLKFFQTDICSQLRKSDFVGLTSGEPVVRDLANNGMVLSSVLSKMSVIPEYEYIWQGVFEVHRNGKPPPDLYAGIQAHLSACASPKVIETVRNFSPEVSLNEVSRLSIWPSQFHQSGAKEDNIALYFFAKDTESYERHYKGLLDHMIRNDLALRGMFGGVELLIFASNQLPEDSQRWNMLFFLWGTFRGRRINHSNSTKSKCIPSLNVMPNEKDFPSAVMTLSETWCSPKRVNEESIDQGNNMPCRNFVSKGTVFGQTHLELQVKLETPDSSVNTKSTSGILITSTQLCQEMNSTGSSLGDSAPEHRQCIQSKPPEVTGTSVSRRIVETKTNPDISGKQEPSSSLEIPSVDCQIDTASNIIKDKILERTVYDENQRRPKRKQLENDLNINEEATMLQGDLDLKGANCLVPNDKKIKHIDLSDTLVEASAVSSQKRPLNVVNCKLEDTESSKKLQKSLGGVFECNESAGARVSFNGSFASLVNDLGSCSSVGKGCKEACDEKIIHEDLGTMERTFFPVDNRNKLNSGMVVNRESLNGAGEYVDQFEVGIPNLELALGGETKPSHKSMLPFFVGAVDKKINPEKTPDIERDDENVAASLSLSLSFPSSSKEHMKPVTKNEPLPTDGHNAKSSFLLFGRFTDK* 1422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0184 1421 MobiDBLite consensus disorder prediction 488 510 - -
Pvu11g0184 1421 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 21 1169 - -
Pvu11g0184 1421 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1173 1409 - -
Pvu11g0184 1421 MobiDBLite consensus disorder prediction 548 646 - -
Pvu11g0184 1421 MobiDBLite consensus disorder prediction 94 116 - -
Pvu11g0184 1421 MobiDBLite consensus disorder prediction 619 640 - -
Pvu11g0184 1421 MobiDBLite consensus disorder prediction 1074 1102 - -
Pvu11g0184 1421 MobiDBLite consensus disorder prediction 69 116 - -
Pvu11g0184 1421 MobiDBLite consensus disorder prediction 348 448 - -
Pvu11g0184 1421 MobiDBLite consensus disorder prediction 348 394 - -
Pvu11g0184 1421 SUPERFAMILY FYVE/PHD zinc finger 279 341 IPR011011 -
Pvu11g0184 1421 PANTHER - 21 1169 - -
Pvu11g0184 1421 PANTHER - 1173 1409 - -
Pvu11g0184 1421 MobiDBLite consensus disorder prediction 426 448 - -
Pvu11g0184 1421 SMART PHD_3 290 337 IPR001965 -
Pvu11g0184 1421 MobiDBLite consensus disorder prediction 1385 1408 - -
Pvu11g0184 1421 MobiDBLite consensus disorder prediction 567 618 - -
Pvu11g0184 1421 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 226 350 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0184 Pvu-Chr11 1425799 1436498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0184 184 349 C2H2 Transcription Factor Family AT3G01460 25.146 1.79e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0184 - - vun:114169861 2343.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0184 11 1425799 1436498 Pvu2g0431 2 3967163 3976384 ECH
Pvu11g0184 11 1425799 1436498 Pvu11g0184 11 1425799 1436498 ECH