Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0182 ATGAACAACAGTGGTGGAGGAACTTTGATGGGTTTGAGCAATGGTTATTATGGGAGATCGCCATTCACAGTGTCTCAGTGGGAGGAACTGGAGCACCAAGCTTTGATCTTCAAGTACATGCTTGCTGGTCTTCCTGTGCCTCACAATCTCGTGCTCCCCATTCAGAAGAGCTTCTTTCACCACCCCACATTGAGTTATTGTTCCTTCTATGGGAAGAAGGTGGATCCAGAGCCAGGGAGATGCAGGAGAACTGATGGAAAAAAATGGAGGTGCTCCAAGGAAGCATACCCTGAATCCAAGTACTGTGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACTGTGACTCAATCTTCTTCAACTGTCACATCACTTGATGGTGGCAGTGGCAGAAGTAGAACTCTAAACTTCCAAAACCTTCCTGCAAATGGCTTTGGTAATCTCCAGGGTACTGATTCTGGAACTCACCATACCAATTATCATGTTGATTCCATTCCTTATGCCATCCTAAGTAAAGAATGCAGGTATCTTCAAGGACTTAAATCTGAGGGTGGTGATCATATATTCTTCTCAGAAGCTTCAGGAAGCAACAAGGTGCTCCAAATGGAGTCACATCTGGAACAGACATGGCCTTTGATGTCTACCAGAGTTGTCTCTTTCACTACATCAAAATCAACACTGTTGCATAGTGATTTTCCCCAACATTCGTTTTTGTCTGGTGAATATGCATCAGAAGAGCACCTGAAGGAGGAGGATCATCAATCTCTTCGACCCTTTTTCAATGAATGGCCAAAAAGCAGGGATTCATGGTCTGCACTGGAAGATGAGAGATCTAACCAAACAGCATTCTCCACAACTCAACTCTCAATCTCCATTCCCATGTCTTCTGATATCTCTGCAACGAGCTCTCAGTCCCCACATGGTGAGAATGAGATTCAATTTCGGTAA 969 0.4499 MNNSGGGTLMGLSNGYYGRSPFTVSQWEELEHQALIFKYMLAGLPVPHNLVLPIQKSFFHHPTLSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPESKYCERHMHRGRNRSRKPVESQTVTQSSSTVTSLDGGSGRSRTLNFQNLPANGFGNLQGTDSGTHHTNYHVDSIPYAILSKECRYLQGLKSEGGDHIFFSEASGSNKVLQMESHLEQTWPLMSTRVVSFTTSKSTLLHSDFPQHSFLSGEYASEEHLKEEDHQSLRPFFNEWPKSRDSWSALEDERSNQTAFSTTQLSISIPMSSDISATSSQSPHGENEIQFR* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0182 322 MobiDBLite consensus disorder prediction 116 147 - -
Pvu11g0182 322 Pfam WRC 76 118 IPR014977 -
Pvu11g0182 322 ProSiteProfiles QLQ domain profile. 21 56 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pvu11g0182 322 MobiDBLite consensus disorder prediction 301 322 - -
Pvu11g0182 322 PANTHER - 18 308 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pvu11g0182 322 ProSiteProfiles WRC domain profile. 75 119 IPR014977 -
Pvu11g0182 322 MobiDBLite consensus disorder prediction 105 147 - -
Pvu11g0182 322 Pfam QLQ 21 55 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pvu11g0182 322 PANTHER GROWTH-REGULATING FACTOR 5 18 308 - -
Pvu11g0182 322 SMART QLQ_2 20 56 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0182 Pvu-Chr11 1407127 1410908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0182 8 118 GRF Transcription Factor Family AT3G13960 57.377 1.50e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pvu11g0182 WRC 6.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0182 - - gmx:100787567 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0182 11 1407127 1410908 Pvu11g0182 11 1407127 1410908 ECH