Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0180 ATGGCACCTTCTCGAAGTGTTACCGATTCGATTCCTCCGTCAACAACGCCGGAAGTTGAAGAGAACGATCTTCGGCCGTTCTTTGTTCTTCATAAAGCTTCATCTCGGAGAAAAGATAGAACACCAACTGCACAGGCAAAGTTGTGCAAGAGAAATGAGTTATCTTCATCACCACAAAGTGCAAAGAAGTTGGGAGGAAGTATGACAGAGGAATGTGATCTCCATTTGTTTCAGCAACTGCAGATTGAAGCTTTTGAAATTGTTTGGGCAAAGATTGAATCTACTATTAAGGATGTTTTAAGAGATCTCAATGCCAGTGTATTTGATGATATACAACAATGGGTTCTGGAGTGCTTCAACACTACTAAGTTGCTTGGACAACATACTATTGCTGAAGCAACTCGGTCTTTTCCTGTTCTAAATAATACTACTCCTGGGAAGTTGTTCACTGCCTTCGTTGTCACCAGAAACATAGAGTTCGTTGATGATATATTGACATTTGAAGAGCTTGGCCATTTCTTGAAATCCCATGGATGTCATGTGGCTAAGCTTTCGTCAATGGAGTTTTCATTGAAAAATGGGATTTCTGGTTGCTTGAAAGCTCTATTGCGAGAGTTTCTTGGATGTGCTATTGATTCAGCAGATATATCAATCTTAGCATCATGGTATAGAGAACACGTAAACTACAATAAACCACTGGTGCTGATCATTAATGATTTGGGGAGATGTTCTGGACCAGTCTTAACTGATTTTATCTTGATGTTGAGTGAATGGATTGTCAAGGTTCCAATTATCTTCATATTTGGAGTTGCAACGACAGTGGATACCCTGAGAAACATTCTGCCATCACATGCTCTTGAGCATTTGTGTCCCTCTAGTTTTAAGCTTGGAGCACCAGCTGAGAGAATGGATGCAGTTGTTGAGGCTGTTCTCGTGAAACATTGCACCATGTTTAGTATTGGTCATAAAGTGGCAGTCTTCCTAAGAAACTACTTCATCAACCAGGATGGGACAATAACATCCTTTATTAGAGCTCTGAAGGTAGCTTGCTTATTACATTTCTCAACGGAACCTCTAAGTCTCTTACATGGACGAGCACTAGCTGAAGATCAGAAAGTGAGAAAATCTGCACTATCACCTGAGACTCTGCTGAAATACATAGACGAACTTCCGTTGTATGCAAGGAATCAAATTACTGATCATCACACTAAACAGAGCACCGCTGAGGGTTTGTCAGAATTGGTGACAAAGCAGAAGCTATGGAGTACTGCAGTTCTGTGCCTATATGAAGCTGGAAAATATAGCAGAGTGCGACTATTGGATTTGTTATGTGAAGCTCTCAATCAAGATTTGAACCTGTCAAGGGGTTCTGATTGTCATGTTGGGGATGAAAGATATTGTGGTTTGTCTTCGACAAATGATTCCTGTCAACAATATTCCATCATGCAAAGCGGTGGTTTTATTAGCCAGATAGTACGCAAAGTGAGGGATCTCCCCACAGGGATGCTATATCAGTTGATTGAGAATTGGGAAAAACTTACTGCAGATATTTCAGAGATTCAAGAGAAACTGAAAGTCTTGCAGTCTTCAGTAAGATGTGAAGATGGAAAGAGTCCACGCAAGAGTTCCAAGGACAATCCCAAGAGATCTGCGTCCAGGATTCCAGTAAACACTGATAAGGACGCAAGGCTAAATTCACAAGCTATCGCATTTTTAGACTATCTTGTTGGGAATTTTTTGAAGCCCATTGAAGGCATGCCTTTCCACGAGATTTTATGTTTCAAGAATGTTGAGAAGCTTCAATTGGTTTTGATTGGAGATCCAAGAAGAAGAATTCAAGTTGATCTGTTGGAGTTCCATAAGATTTTAAAGTGTAGCTGCTGTAGCAAGAGTGGCAATGCCCTATTGCCATCCAGGCATGATTCCTCAATTATGTATTCTTTGGCTCAAGAGCATGGAGATCTTATCAATCTCCATGACTGGTTCCAATCTTTTAGAACAATTGTTCTTCAAAATAAAAATAAACGGAAACAAAATTCAAAGCAATCCCCCCAACCAAAGAAGAGAAAAGCTATAAATGGATCTGCAGACCAAAACGAAGCATCAGTTCAAGCACGCTTTTGTAGGACAGTTACAGAGCTGCAGATCACTGGACTGGTTAGAATGCCCAGCAAGAGACGCCCAGATTTTGCGCAAAGAATAGCATTTGGACTCTGA 2217 0.406 MAPSRSVTDSIPPSTTPEVEENDLRPFFVLHKASSRRKDRTPTAQAKLCKRNELSSSPQSAKKLGGSMTEECDLHLFQQLQIEAFEIVWAKIESTIKDVLRDLNASVFDDIQQWVLECFNTTKLLGQHTIAEATRSFPVLNNTTPGKLFTAFVVTRNIEFVDDILTFEELGHFLKSHGCHVAKLSSMEFSLKNGISGCLKALLREFLGCAIDSADISILASWYREHVNYNKPLVLIINDLGRCSGPVLTDFILMLSEWIVKVPIIFIFGVATTVDTLRNILPSHALEHLCPSSFKLGAPAERMDAVVEAVLVKHCTMFSIGHKVAVFLRNYFINQDGTITSFIRALKVACLLHFSTEPLSLLHGRALAEDQKVRKSALSPETLLKYIDELPLYARNQITDHHTKQSTAEGLSELVTKQKLWSTAVLCLYEAGKYSRVRLLDLLCEALNQDLNLSRGSDCHVGDERYCGLSSTNDSCQQYSIMQSGGFISQIVRKVRDLPTGMLYQLIENWEKLTADISEIQEKLKVLQSSVRCEDGKSPRKSSKDNPKRSASRIPVNTDKDARLNSQAIAFLDYLVGNFLKPIEGMPFHEILCFKNVEKLQLVLIGDPRRRIQVDLLEFHKILKCSCCSKSGNALLPSRHDSSIMYSLAQEHGDLINLHDWFQSFRTIVLQNKNKRKQNSKQSPQPKKRKAINGSADQNEASVQARFCRTVTELQITGLVRMPSKRRPDFAQRIAFGL* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0180 738 MobiDBLite consensus disorder prediction 48 64 - -
Pvu11g0180 738 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 21 737 - -
Pvu11g0180 738 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 21 737 IPR020795 GO:0003677|GO:0005664|GO:0006260
Pvu11g0180 738 MobiDBLite consensus disorder prediction 24 46 - -
Pvu11g0180 738 MobiDBLite consensus disorder prediction 673 689 - -
Pvu11g0180 738 MobiDBLite consensus disorder prediction 1 64 - -
Pvu11g0180 738 MobiDBLite consensus disorder prediction 534 548 - -
Pvu11g0180 738 Pfam Origin recognition complex winged helix C-terminal 609 736 IPR040855 -
Pvu11g0180 738 MobiDBLite consensus disorder prediction 1 17 - -
Pvu11g0180 738 MobiDBLite consensus disorder prediction 673 698 - -
Pvu11g0180 738 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 77 362 IPR045667 -
Pvu11g0180 738 MobiDBLite consensus disorder prediction 534 557 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0180 1 670 Core DNA Replication Machinery Family AT5G16690 47.153 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0180 K02605 - gmx:100780646 1232.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0180 11 1373278 1383000 Pvu11g0180 11 1373278 1383000 ECH