Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0155 ATGAACTGGGATGAAGAGGGCATACGCATAATCAATCTTCTTAAAGAGTGTGCAACTTTTACTGAATCAGAAAACTTCATTGGTGCAGATATTGCACTGTACCATCTCTCTCGCCTTGTTTCCCCAGATGGTGATTCAATGCAACGTGTTGCTACTTATTTCACCGAGGCACTAGCATGTTGCCAAATGACAAAAAATCTGCGTGGTGTTCCAAAAGTTCTCCGTTTGGTGAGAACATTATCAACTCCTGAACAACAACTCGTGAAGAAACTGTTCTTTGATTTCTACCCCTTCTTAAAGATCGCACACACAGTCACAAATCAGACGATTATAGAAGCCATGCAGGGGGAAACAGCGATTAATGTGCTTGATCTGAGTCCATCAAACGCTGATCAGTGGACTGGTCTGATGCAGAGTTTGAGAGAGCGTCTAACAAACACACCGTATCTGAAGATTACAGTCACAGCCATTCATGAGAAGAAGGAAGTGTTGGAGCAAATGGGGTTGCATCTGAAAGTTGAAGCTGAAAGATTGCACTTCCATTTCGAATTCAATGCTGTTGTGAGCAGTTTGGAGAGCCTAGACCCTGAGACATTGCCCATCAAGAAAGGTGAGCCTCTTGCAATCAGCTGTGTTCTTCAGCTTCACTCTCTTCTGGCTGCCAATGATGATGAGACGGTCAAAATGAAGGGTCAAAGGGTTTTTGCTGAGATGCTTGTGAAACAGAAGAACAAGAAGGTGAAACCAAGTCCTGACTCAGCACTCTCACCTTTTTCTCCATGTCCATCACATAAGATGGAGTGTTTTCTGAATGGTCTGTGGAGGCTGCAACCCAGAGTGATGGTGGTGACAGAGCAGGAGTCAAATGTTAATGGAAGTAGCTTGAGAGAGAGGGTGTCCAAAGCTTTGAACTTTTACAGCACACTGTTTGATTGCTTGGAAGCGTCTACTTCAAGAACATGGGTAGGGAGAAGCCTGTTGGAGAAGATGCTTCTTGGTGAAGAGATCAAGAACATTGTTGCATGTGAAGGGGTTGAGAGAAAGGAGAGGCATGAGAAGCTTGAAACATGGATTCCAAGACTTGAATTGGCTGGATTTGGAAGAGTTCCTATCAGCTCCAATGGGATTTGGCTGGCAACAAAGTTGTTGCAGAGCTATGTACCAAGTTACCACATTCATCACAAGAACAAGTTCTTGTTCATTTGTTGGGAGAAAATTCCTCTCTTTTCAATTTCAGCCTGGAAGTTTTAG 1251 0.4365 MNWDEEGIRIINLLKECATFTESENFIGADIALYHLSRLVSPDGDSMQRVATYFTEALACCQMTKNLRGVPKVLRLVRTLSTPEQQLVKKLFFDFYPFLKIAHTVTNQTIIEAMQGETAINVLDLSPSNADQWTGLMQSLRERLTNTPYLKITVTAIHEKKEVLEQMGLHLKVEAERLHFHFEFNAVVSSLESLDPETLPIKKGEPLAISCVLQLHSLLAANDDETVKMKGQRVFAEMLVKQKNKKVKPSPDSALSPFSPCPSHKMECFLNGLWRLQPRVMVVTEQESNVNGSSLRERVSKALNFYSTLFDCLEASTSRTWVGRSLLEKMLLGEEIKNIVACEGVERKERHEKLETWIPRLELAGFGRVPISSNGIWLATKLLQSYVPSYHIHHKNKFLFICWEKIPLFSISAWKF* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0155 416 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 415 IPR005202 -
Pvu11g0155 416 ProSiteProfiles GRAS family profile. 1 415 IPR005202 -
Pvu11g0155 416 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 6 415 - -
Pvu11g0155 416 Pfam GRAS domain family 11 415 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0155 Pvu-Chr11 1197019 1198269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0155 4 415 GRAS Transcription Factor Family AT1G50420 43.478 5.72e-113 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu11g0155 GRAS 6.3e-98 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0155 - - vra:106778126 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0155 11 1197019 1198269 Pvu11g0155 11 1197019 1198269 ECH