Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0149 ATGGCAGACAGTGTAGTTACCTTTGTTTTGGATCATTTATCTGAGCTTGTGGCACGCGAAGCTCACTTGCTGTATGGTGTGGAGGATAGGATCCAGTCCCTCCAGAACGAGCTTCAGATGATCAATGACCTCCTCAATACCTCAAAAAGCAAGAAGGGAATTGATAATACAGTGGTGAATCAAATCAGAGATGTGGCCCACCTAGCTGAGGATGTCATCGACACTTTCGTAGCCAAAGTTGCCATTTACAAAAGGAGAACCATGCTGGGGAGGATGCTCCATGGCTTTGCCCAAGCAAGGTTGCTCCATGACGTAGCCGACAAAGTAAACAAGATAAAAACCACCCTCAACGAAATACGCGAAAATAAGGACAAATATGATGCTTTCGAAGAAATCAATAATCAATCCGCAGCAAAAGAGGAGGAGGAGAAGAAAAGGGCGCAATCACTGCACAAGCTAAGAAAAAATGTGGAGGAAGAAGGTGTGGTTGGCTTTGTCCATGACTCCAACGTTGTCATCAAACGACTATTGGAAGGTGGTTCAAATCGTAAAGCTGTCTCTATCATTGGCATGGGGGGATTGGGCAAGACCACCCTTGCCCGGAAGGTCTATAACAACAGCGAGGTGAAGCAACACTTCGAATGTCGAGCGTGGGTTTATGTGTCAAACGAGTGCAGAGTTAGGGAGCTTTTGCTTGGCCTTCTTAAGCATTTGATGCCAAATTTTGATCAACAATGCAAAGACAAGAAGAAAGGTAAAAAAAGTAGTCGAGCTAGTAGTAACTTGAGTGAGGAGGAGCTGAAGAAACTAGTGCGGAACAAGTTGGAGAGTAGAAGGTATCTTGTGGTGGTAGATGACCTGTGGAAAAGGCAAGATTGGGATGAGGTGCAAGATGCTTTTCCCGACAACAATAGAGGCAGTAGAATATTGATAACTAGTCGTCTGAAAGAGGTGGCCCTGCATACTGCCCATGATCTTCCTTACTATCTTCAGTTTCTCAGTGGAGAAGAAAGTTGGGAGTTGTTTTGCAGAAAAGTGTTTAGGGGTGAAGACTATCCTTCTGATTTGGAGGCTCTTGGAAAGCAGATGGTTCAAAGTTGTCGAGGTTTGCCGCTCTCCATCATTGTCTTAGCAGGGCTGCTAGCCTACAAGGAAAAGTCACACAGAGAATGGTCAAAAGTGGTGGGTCATGTTAATTGGTATCTCACTCAAGATGAGACCCAGGTGACAGATACAGTTCTCAAACTCAGCTACGACAACTTGCCAAGGAGATTAAAACAATGTTTTCTCTATCTTGGGATATTTCCTGAAGACTTTGAAATCCCTGTCACACCATTATTGCAAAAATGGGTTGCCGAGGGTTTTATACAAGATACAGGGAATCGAGACCTAGATGACATTGCGGAAGACTACTTGTACGAACTCATCGATCGCAGTTTGGTCCAAGTAGCAAAAGTGAAGACTAATGGACGTTTGGAGACATGTCAGGTTCATGATCTTCTTCGAGATCTTTGCATATCAGAGAGCAAAGAGGACAAAGTTTTTGAAGTTTGCACAGACAATAACATTCTAATCCCGACAAAACCTCGTAGACTGTCCATTCACAGTAACATGGGTAACTACATTTCTTCAAGCAACAATGACCATTCATGTATCCGATCCCTCTTCTTCTTTGACCCACGTTACTCTATTTATGGGACGGAATGGAAGTGGCTTTCGAAAGGCTTCAAATTAGTTCGAGTAATGGAGTTTAGTTATATCGGATTGAATAAGATCCCTTCCAATTTGGGGAACTTTATCCACTTAAGCACGATCTATCGAGCTACAAGGAAATTGTTCAGGAGCAGTTGA 1851 0.4349 MADSVVTFVLDHLSELVAREAHLLYGVEDRIQSLQNELQMINDLLNTSKSKKGIDNTVVNQIRDVAHLAEDVIDTFVAKVAIYKRRTMLGRMLHGFAQARLLHDVADKVNKIKTTLNEIRENKDKYDAFEEINNQSAAKEEEEKKRAQSLHKLRKNVEEEGVVGFVHDSNVVIKRLLEGGSNRKAVSIIGMGGLGKTTLARKVYNNSEVKQHFECRAWVYVSNECRVRELLLGLLKHLMPNFDQQCKDKKKGKKSSRASSNLSEEELKKLVRNKLESRRYLVVVDDLWKRQDWDEVQDAFPDNNRGSRILITSRLKEVALHTAHDLPYYLQFLSGEESWELFCRKVFRGEDYPSDLEALGKQMVQSCRGLPLSIIVLAGLLAYKEKSHREWSKVVGHVNWYLTQDETQVTDTVLKLSYDNLPRRLKQCFLYLGIFPEDFEIPVTPLLQKWVAEGFIQDTGNRDLDDIAEDYLYELIDRSLVQVAKVKTNGRLETCQVHDLLRDLCISESKEDKVFEVCTDNNILIPTKPRRLSIHSNMGNYISSSNNDHSCIRSLFFFDPRYSIYGTEWKWLSKGFKLVRVMEFSYIGLNKIPSNLGNFIHLSTIYRATRKLFRSS* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0149 616 PANTHER - 44 605 - -
Pvu11g0149 616 Coils Coil 102 122 - -
Pvu11g0149 616 Pfam Rx N-terminal domain 5 81 IPR041118 -
Pvu11g0149 616 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 432 IPR027417 -
Pvu11g0149 616 CDD RX-CC_like 2 121 IPR038005 -
Pvu11g0149 616 PANTHER DISEASE RESISTANCE PROTEIN RP 44 605 IPR044974 GO:0006952
Pvu11g0149 616 Gene3D - 418 509 IPR036388 -
Pvu11g0149 616 Gene3D - 332 417 IPR042197 -
Pvu11g0149 616 Coils Coil 31 51 - -
Pvu11g0149 616 Pfam NB-ARC domain 170 420 IPR002182 GO:0043531
Pvu11g0149 616 Coils Coil 140 160 - -
Pvu11g0149 616 Gene3D - 5 98 - -
Pvu11g0149 616 Gene3D - 149 325 IPR027417 -
Pvu11g0149 616 PRINTS Disease resistance protein signature 185 200 - -
Pvu11g0149 616 PRINTS Disease resistance protein signature 274 288 - -
Pvu11g0149 616 PRINTS Disease resistance protein signature 367 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0149 Pvu-Chr11 1147179 1150121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0149 184 514 WRKY Transcription Factor Family AT5G45050 23.631 3.24e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0149 - - vra:106756053 964.14