Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0148 ATGTGGCTGCAAGCTACAATCCATTGTTGTTCTTCCATCACCAACCACAAACACATTATCCAAGCACAGATCAAAATCTGCAGGCACGTCTATGCTGTAATGGCAGACAGTGTAGTTTCCTTTGTTTTGGATCACTTATCTGAGCTTGTGGCACGTGAAGCTAACTTGCTGTATGGCGTGAAGGACAGGGTCCAGTCCCTCCAGAACGAGCTTCAAATGATCAACGAACTTCTCAATACCTCAAAGAGAAAGAAAGGAATTTCAAATACAGTGGTGAACCAAATCAGAGATGTGGCCCACCTAGCTGAGGATGTCATCGACACTTTCGTAGCCAAAGTTGCCATTTACAAGAGGAGAACCATGCTCGGGAGGATGCTTCATGGCTTTGGCCAAGTAAGGTTGCTCCATGACGTAGCCGACAAAGTAGACAAGATGAAAACCACTCTCAACGAAATACGCGACAACAAGGACAAATATGATGCTTTCAAAGAAATCAATAATCAATCTGCAGCAGAAGAGGAGGAGGAGAAGGAAAGGGCGCAATCATTACACAAGCTAAGAAGAGATGTAGAGGAAGAAAATGTGGTTGGCTTTGTCGATGACTCCAAGGATATCATCAAACGAATCTTGGAAGGTGGTTCAAATCGTAAAGTTGTCTCTATCATTGGCATGGGGGGATTGGGCAAGACCACCCTTGCTCGGAAGGTCTATAACAGCAGCGAGGTGCAGCAACACTTCGAGTGTCGAGCGTGGGTTTATGTGTCAAACGAGTGCAGAGTTAGGGAGCTTTTGCTTGGCCTTCTTAAGCATTTGATGCCAAATTTTGAACAACAATGCAGAGGCAAGAAGAAAGGAAAGAAAAGCACTCAAGACAATAGTAGCTTGAGTGAGGAGGAGCTGAAGAAACTGGTGCGAAACAGCTTGGAGAGTAGAACATATCTTGTGGTGGTAGATGACCTGTGGAAAAGGCAAGATTGGGACGAGGTGCAAGATGTTTTTCCGGACAACAACAGAGGCAGCAGAGTATTGATCACTAGTCGTTTGAAAGAGGTGGCACTGCATACTTCCCATGATCTTCCTTACTATCTGCAGTTCCTGAGTGAAGAAGAAAGTTGGGAGTTGTTTTGCAGGAAAGTGTTTAGGGGTGAAGACTACCCTTCTGATTTGGAGGCTCTTGGAAAGCAAATGGTTCAAAGTTGTCGTGGTTTGCCGCTCTCCATCATTGTCTTAGCAGGACTGCTAGCCTACAAGGAAAAATCACACAGAGAATGGTCAAAAGTGGTGGGTCATGTTAATTGGTATCTCACTCGAGATCATACCCAAGTGAAGGATATAGTTCTCAAACTCAGCTATGACAACTTGCCAAGGAGATTAAAACCATGCTTTCTCTATCTTGGGATATTTCCTGAAGACTTTCAAATCCCTGTTACGCCATTATTGCAAAAATGGGTTGCCGAGGGTTTTATACAAGATACAGGGAATAGAGATCCAGATGAAGTTGCTGAAGACTACTTGTATGAGCTCATCGATCGTAGTTTGGTCCAAGTAGCAAAAGGGAAGACTAATAGAGATGTTCACGTTCATGATCTTCTTCGAGACCTCTGCATATCAGAGAGTAAAGAGGACAAAGTTTTTGAAATTTGCACAGACAATAACATTCTAATCCCGACAAAACCTCGTAGACTATCCATTCACTGTAAGGTGGGTCATTACATTTCTTCGAGCAACAATGATCATTCATGTATCCGATCCCTGTTCTTATTTGGCCAAGATGACTTTGGTACTGGGAAGCAGTGGAAATGGCTTTCAAAAGACTTCAAATTGGTTCGAGTGTTGGAGCTTGGACCAACCTGGCTTAGCACCCTTTCTAATTTAGGGAACTTTATCCACTTAAGGTACTTGAGAATTGAAGCAACATCTGATTTTACATTTGTTCCATCTTCAATACTTCACCTTTGGAATCTACAAATCATAGACCTAAGTAATTGGAGGTATGTGACTGAAATTTCTTTCCCAGTCGAAATGTGGAAACTTAAACATTTAAGGCATTTGAATGCACGAGGGCCTATCAAGCTACGAGGCAATTGTTCAGGATCAGATGAGAAGATGTGGAATCTTCAAACCATCTCTGACCTCGTAGTCAACAGACAAGCAACATCTCTGATAAAGAAAGGAACATTCCCCAATCTTAAGATGATAAGGTTGTGTGTGACTTCTGAATACAAAGATGATGAAATAACCAAATTGTTGCAAAGCCTACAACAATCAAGTCATTTGAGTAAGTTAGAGATTGTCCTCTGGGATATTTATGACAAAGGTTGCAAGCCGAAAGAACTGTTGCAAAGCCTAGGGCAGTTCAATTGTATAACTTTCTTAATTATTGAAAATGTTTTTGACCTTCTGACTTGTGCATTCACATTTCCTCCAAACGTTATGGAGTTAGAGTTGTCAGAGATTAACCGCATTACTGATGAGGGGATGAATGGTTTGGGAAATCTCACCAAACTCAAAATTTTGGAACTTTGGGGACCTCTATATAAGGGGGATTCCTTTGACCTGAATTGTGTGGAAGGCAGCTTCCCAAAATTGGAAGTTTTTGAAATGGCATATTTGAGTCTTGAAAAGTGGAAATTAGGCAATGGTGGAATGTCAAGGCTTCAAAGTTTGATCATCTACAATTGTGAAAGCTTAGATGATCTCCCAAATGAACTTTGGTCTTTGAGTGGCTTGAGAAGAGTAAATGTAAGGGAATGCTCGAAACAAATGTATGACACGCTACGGAATTTAGAAACAAACAATGGGGTTGAACTCATCCTAGAGGAAGATCGTGATACTTTATTGTAA 2844 0.4167 MWLQATIHCCSSITNHKHIIQAQIKICRHVYAVMADSVVSFVLDHLSELVAREANLLYGVKDRVQSLQNELQMINELLNTSKRKKGISNTVVNQIRDVAHLAEDVIDTFVAKVAIYKRRTMLGRMLHGFGQVRLLHDVADKVDKMKTTLNEIRDNKDKYDAFKEINNQSAAEEEEEKERAQSLHKLRRDVEEENVVGFVDDSKDIIKRILEGGSNRKVVSIIGMGGLGKTTLARKVYNSSEVQQHFECRAWVYVSNECRVRELLLGLLKHLMPNFEQQCRGKKKGKKSTQDNSSLSEEELKKLVRNSLESRTYLVVVDDLWKRQDWDEVQDVFPDNNRGSRVLITSRLKEVALHTSHDLPYYLQFLSEEESWELFCRKVFRGEDYPSDLEALGKQMVQSCRGLPLSIIVLAGLLAYKEKSHREWSKVVGHVNWYLTRDHTQVKDIVLKLSYDNLPRRLKPCFLYLGIFPEDFQIPVTPLLQKWVAEGFIQDTGNRDPDEVAEDYLYELIDRSLVQVAKGKTNRDVHVHDLLRDLCISESKEDKVFEICTDNNILIPTKPRRLSIHCKVGHYISSSNNDHSCIRSLFLFGQDDFGTGKQWKWLSKDFKLVRVLELGPTWLSTLSNLGNFIHLRYLRIEATSDFTFVPSSILHLWNLQIIDLSNWRYVTEISFPVEMWKLKHLRHLNARGPIKLRGNCSGSDEKMWNLQTISDLVVNRQATSLIKKGTFPNLKMIRLCVTSEYKDDEITKLLQSLQQSSHLSKLEIVLWDIYDKGCKPKELLQSLGQFNCITFLIIENVFDLLTCAFTFPPNVMELELSEINRITDEGMNGLGNLTKLKILELWGPLYKGDSFDLNCVEGSFPKLEVFEMAYLSLEKWKLGNGGMSRLQSLIIYNCESLDDLPNELWSLSGLRRVNVRECSKQMYDTLRNLETNNGVELILEEDRDTLL* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0148 947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 465 IPR027417 -
Pvu11g0148 947 Gene3D Ribonuclease Inhibitor 603 846 IPR032675 -
Pvu11g0148 947 PANTHER - 76 935 - -
Pvu11g0148 947 Coils Coil 64 84 - -
Pvu11g0148 947 Gene3D - 181 359 IPR027417 -
Pvu11g0148 947 Gene3D - 365 450 IPR042197 -
Pvu11g0148 947 Pfam NB-ARC domain 203 452 IPR002182 GO:0043531
Pvu11g0148 947 Gene3D - 38 139 - -
Pvu11g0148 947 Gene3D Ribonuclease Inhibitor 852 939 IPR032675 -
Pvu11g0148 947 Coils Coil 135 155 - -
Pvu11g0148 947 Gene3D - 451 538 IPR036388 -
Pvu11g0148 947 PANTHER DISEASE RESISTANCE PROTEIN RP 76 935 IPR044974 GO:0006952
Pvu11g0148 947 PRINTS Disease resistance protein signature 218 233 - -
Pvu11g0148 947 PRINTS Disease resistance protein signature 307 321 - -
Pvu11g0148 947 PRINTS Disease resistance protein signature 400 414 - -
Pvu11g0148 947 PRINTS Disease resistance protein signature 650 666 - -
Pvu11g0148 947 SUPERFAMILY L domain-like 527 929 - -
Pvu11g0148 947 CDD RX-CC_like 35 154 IPR038005 -
Pvu11g0148 947 Pfam Rx N-terminal domain 38 114 IPR041118 -
Pvu11g0148 947 Coils Coil 173 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0148 Pvu-Chr11 1134677 1137603 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0148 217 534 WRKY Transcription Factor Family AT5G45050 24.534 7.64e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0148 - - vra:106779070 1252.27