Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0147 ATGGCAGACAGTGTAATGCCAGACAGTGTAGTTACTTTTGTTTTGGATCACTTATCCCAGCTTGTGGCACACGAAGCTAACTTGCTGTATGGCGTGGAGGACAGAGTCCAGTCCCTTCAGAACGAGCTTCAAATGATCAACGACCTTCTCAATACCTCAAAGAGAAAGAAGGGAATTGAAAATACAGTGGTGAACCAAATCAGAGATGTGGCCCACCTAGCTGAGGATGTCATCGACACTTTCGTAGCCAAAGTTGCCATTTACAAGAGGAGAACCATACTGGGGAGGATGCTCCGTGGCTTTGCCCAAGCAAGGTTGCTTCACCACGTAGCCGACAAAATAGACAAGATCAAAACCACTCTCAACGAAATACGCGAAAACAAGGACAAATATGATGCTTTCAAAGAAATCAATAATCAATCTGCAGCAGAAGAGGAGGAGGAGAAGGAAAGGGCGCAATCATTACACAAGCTAAGAAGAGATGTAGAGGAAGAAAATGTGGTTGGCTTTGTCGATGACTCCAAGGATATCATCAAACGACTCTTGGAAGGTGGTTCAAATCGTAAAGTTGTCTCTATCATTGGCATGGGGGGATTGGGCAAGACCACCCTTGCCCGGAAGGTCTATAACAGCAACGAGGTGAAGCAACACTTCGAGTGTCGAGCGTGGGTTTATGTGTCAAACGAGTGCAGAGTTAGGGAGCTTTTGCTTGGCCTTCTTAAGCATTTGATGCCAAATTTTGAACAACAATGCAGAGGCAAGAAGAAAGGAAAGAAAAGCACTCAAGACAATAGTAGCTTGAGTGAGGAGGAGCTGAAGAAACTGGTGCGAAACAGCTTGGAGAGTAGAACATATCTTGTGGTGGTAGATGACCTGTGGAAAAGGCAAGATTGGGACGAGGTGCAAGATGTTTTTCCGGACAACAACAGAGGCAGCAGAGTATTGATCACTAGTCGTTTGAAAGAGGTGGCACTGCATACTTCCCATGATCTTCCTTACCATCTCCAGTTCCTGGATGAAAAAGAAAGTTGGGAGTTGTTTTGCAGAAAAGTGTTTAGAGGTGAAGACTACCCTTCTGATTTGGAGACTCTTGGAAAGCAAATGGTTCAAAGTTGTCGTGGTTTGCCGCTCTCCATCATTGTCTTAGCAGGACTTCTAGCCTACAAGGAAAAATCTCATAGAGAATGGTCAAAAGTGGTGGGTCATGTTAATTGGTATCTCACTCGAGATGAGACCCAGGTGAAGGATATAGTTCTCAAACTCAGCTATGACAACTTGCCAAGGAGATTAAAACCATGCTTTCTCTATCTTGGGATATTTCCTGAAGACTTTCAAATCCCTGTTACGCCATTATTGCAAAAATGGGTTGCGGAGGGTTTTATACAAGATACAGGGAATAGAGACCCAGATGAAGTTGCTGAAGACTACTTGTATGAGCTCATCGATCGTAGTTTGGTCCAAAAAGCAAAAGGGAAGACTAATAGAAATGTTCACGTTCATGATCTTCTTCGAGACCTCTGCATATCAGAGAGCAAAGAGGACAAAGTTTTTGAAATTTGCACAGACAATAACACTCTAATCCCGACAAAACCTCGTAGACTATCCATTCACTGTAAGGTGGGTCATTACATTTCTTCGAGCAACAATGATCATTCATGTATCCGATCCCTGTTCTTATTTGGCCAAGATGACTTTGGTACTGGGAAGCAGTGGAAATGGCTTTCAAAAGACTTCAAATTGGTTCGAGTGTTGGAGCTTGGACCAACCCGCCTTACCACCCTTTCTAATTTTGGGAACTTTATCCACTTAAGGTACTTGAGAATTGAAGCAACACCTGATTTTACATTTGTTCCATCTTCAATACTTCACCTTTGGAATCTACAAATCATAGACCTAAGTTATTGGAGGTATGTGACTGAAATTTCTTTCCCAGTCGAAATGTGGAAACTTAAACATTTAAGGCATTTGAATGCACAAGGGCGTATCAAGCTACGAGGCAGTTGTTCAGGATCAGATGAGAAGATGTGGAATCTTCAAACCATCTCTGGCTTCGTAGTCAACAGACAAGCAACATCTCTGATAAAGAAAGGAACATTCCCCAATCTTAAGATGATAAGGTTGTATGTGACTTCTGAATACAGAGATGGTGAATTAACCAAATTGTTGCAAAGCCTACAACAATCAAGTCATTTGAGTCAGTTAGAGATTGTCCTCTGGTATGAGTATGACAAAGGTTGCAAGCCGCAAGAACTATTGCAAAGCCTAGGGCAGTTCAATTGTCTAACTTCCTTAATGATTAACTATGTTTTTTACCTTCTGACCTATGCACTCACATTTCCTCCAAACGTTATGGAGTTAGAGTTGTTAGAGATTGGTTGCATTAGTGATGAGGGGATGAATGGTTTGGGAAATCTCACCAAACTCAAAATTTTGAGACTTACGGGAGATAGATGTTATGAGGGGGATTCCTTTAACCTGAATTGTGTGGAAGGCAGCTTCTCACAATTGGAAGTGTTTAAAATGAAAAGATTGAAACTTGAGAAATGGAAATTAGGCAATGGTGGAATGTTAAGGCTTCAAAGCCTGGTCATCCAGGATTGTGAAATCTTAGAAGAACTCCCAAATGAACTTTGGTCTTTGAGTGACTTGAGAAAAGTAAAGGTAAGGACATGCTCAGAATCACTGTATGGCAGGCTACTGTATTTAAAACCAAACAATGGGGTTGAACTCATCCTAGAGGAAATTTGA 2748 0.4189 MADSVMPDSVVTFVLDHLSQLVAHEANLLYGVEDRVQSLQNELQMINDLLNTSKRKKGIENTVVNQIRDVAHLAEDVIDTFVAKVAIYKRRTILGRMLRGFAQARLLHHVADKIDKIKTTLNEIRENKDKYDAFKEINNQSAAEEEEEKERAQSLHKLRRDVEEENVVGFVDDSKDIIKRLLEGGSNRKVVSIIGMGGLGKTTLARKVYNSNEVKQHFECRAWVYVSNECRVRELLLGLLKHLMPNFEQQCRGKKKGKKSTQDNSSLSEEELKKLVRNSLESRTYLVVVDDLWKRQDWDEVQDVFPDNNRGSRVLITSRLKEVALHTSHDLPYHLQFLDEKESWELFCRKVFRGEDYPSDLETLGKQMVQSCRGLPLSIIVLAGLLAYKEKSHREWSKVVGHVNWYLTRDETQVKDIVLKLSYDNLPRRLKPCFLYLGIFPEDFQIPVTPLLQKWVAEGFIQDTGNRDPDEVAEDYLYELIDRSLVQKAKGKTNRNVHVHDLLRDLCISESKEDKVFEICTDNNTLIPTKPRRLSIHCKVGHYISSSNNDHSCIRSLFLFGQDDFGTGKQWKWLSKDFKLVRVLELGPTRLTTLSNFGNFIHLRYLRIEATPDFTFVPSSILHLWNLQIIDLSYWRYVTEISFPVEMWKLKHLRHLNAQGRIKLRGSCSGSDEKMWNLQTISGFVVNRQATSLIKKGTFPNLKMIRLYVTSEYRDGELTKLLQSLQQSSHLSQLEIVLWYEYDKGCKPQELLQSLGQFNCLTSLMINYVFYLLTYALTFPPNVMELELLEIGCISDEGMNGLGNLTKLKILRLTGDRCYEGDSFNLNCVEGSFSQLEVFKMKRLKLEKWKLGNGGMLRLQSLVIQDCEILEELPNELWSLSDLRKVKVRTCSESLYGRLLYLKPNNGVELILEEI* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0147 915 Gene3D - 337 422 IPR042197 -
Pvu11g0147 915 Gene3D - 10 104 - -
Pvu11g0147 915 PRINTS Disease resistance protein signature 190 205 - -
Pvu11g0147 915 PRINTS Disease resistance protein signature 279 293 - -
Pvu11g0147 915 PRINTS Disease resistance protein signature 372 386 - -
Pvu11g0147 915 PRINTS Disease resistance protein signature 622 638 - -
Pvu11g0147 915 Coils Coil 36 56 - -
Pvu11g0147 915 Pfam NB-ARC domain 175 425 IPR002182 GO:0043531
Pvu11g0147 915 CDD RX-CC_like 8 126 IPR038005 -
Pvu11g0147 915 PANTHER - 49 895 - -
Pvu11g0147 915 PANTHER DISEASE RESISTANCE PROTEIN RP 49 895 IPR044974 GO:0006952
Pvu11g0147 915 Pfam Rx N-terminal domain 10 85 IPR041118 -
Pvu11g0147 915 Gene3D Ribonuclease Inhibitor 749 899 IPR032675 -
Pvu11g0147 915 Gene3D Ribonuclease Inhibitor 568 736 IPR032675 -
Pvu11g0147 915 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 437 IPR027417 -
Pvu11g0147 915 SUPERFAMILY L domain-like 499 895 - -
Pvu11g0147 915 Gene3D - 423 510 IPR036388 -
Pvu11g0147 915 Coils Coil 145 165 - -
Pvu11g0147 915 Gene3D - 145 330 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0147 Pvu-Chr11 1111643 1114671 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0147 189 506 WRKY Transcription Factor Family AT5G45050 25.309 2.39e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0147 - - vra:106779070 1228.39