Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0146 ATGGCCAAGAAGAAGAGCTGGTTTAGTCTGGTGAAGAGGCTCTTCTTAAGGGACACACATCCCTCACAAGATAAGGAGAAAAGAAGGAAATGGATATTTGGAAGGCTAAAGAGCAAGAGATTACCTTCAATTACAGCTCCACTTCCATCAAAAGAGAAAACACTAAGAGAAGCAGAGGAAGAACAGAGCAAACATGCTTTAACAGTGGCCATTGCCTCAGCAGCTGCTGCTGAAGCTGCTGTCACTGCTGCACATGCTGCTGCTGAGGTTGTTCGTCTCACTGGGGTCTCACAATCTGCCCTTCTGTGCAAAGAAAAGTCAGAAGAATCTCAACCTCTCAAAACTAGTAATGCTTCTCCTCAATTCACACACCAGTGCAAGAGGGCCATTCAAGAATCTGCTGCAGTCATCAGAATTCAAACTGCATTTAGGGGTTACCTGGCAAGGAAGGCTTTGAGGGCATTGAAGGGAATAGTGAAACTACAAGCTATCATTCGTGGCAGAGCAGTGAGACGCCAAGCTATGAGTACTCTTAAGTCCTTGCAGTCCATTGTGAGTATCCAATCACAGGTCTGTGCAAGGAGGCTCCAAATGGTTGGAGGGAGATGTGACTACACTGAAAATGAAGAGATGCATGATTCAAAAGACAAGATAATTAGGATGGACTCAAACAGTGAAAGAAAGTGTGATGACAGCACTCCATCGAAGGAAGAGTTAGACACCTCCTGCATAAGCATGAAAGAAACAGTTCTCAAGAGAGAGAGAATAAAAGAATACTCATTTAACCATAGAAGGTCAGCAGAGTCAGAAAGAAGTAAAGTAAATGGAAGATGGAGATACTGGCTAGAGCAGTGGGTAGATACACAACTTTCAAAGAGTAAAGAACTTGAAGATTTAGACTCAGTTTTTAGCTCTCATGCTGGTGGTGGAGAGGAATATGGAAGCAGACAGCTTAAGGTGAGAAGTATTAACAGGCAAAATCCAGTTGAAGGATTGGATTCTCCAACACTTGGTTCAAGAAGATCTTTCCCTCATAGGAGGCAGTGTTCAGTGGGAGAAGACCAGTCATTTTCAAGCTCTCCTGCAACTCCAGCATACATGGCTGCAACAGAATCGGCAAGAGCAAAAGCAAGATCAACAAGCTCACCAAAAATAAGGACAGGGGGGAATGTGGACATGAACTCTGATAGCTATTCACCATGCAAGAAGAAGCTATCCATTGCTTCTTCTATTAACAGTGAAGTTCTTAGTGGTTGTAGGATGGCAAAGCTCAGTGGTAACCAGCAAAGATCTCCAAGCTTTAAGGGCCTTTCAGTGCCTGTAAAATCAAGCCGAACCATCAAGGATCTCAGTATTAATTCAGATTGTTCACTGCCTAATTTGGCTCTTCATGGTTCCTTCAAATGA 1407 0.4343 MAKKKSWFSLVKRLFLRDTHPSQDKEKRRKWIFGRLKSKRLPSITAPLPSKEKTLREAEEEQSKHALTVAIASAAAAEAAVTAAHAAAEVVRLTGVSQSALLCKEKSEESQPLKTSNASPQFTHQCKRAIQESAAVIRIQTAFRGYLARKALRALKGIVKLQAIIRGRAVRRQAMSTLKSLQSIVSIQSQVCARRLQMVGGRCDYTENEEMHDSKDKIIRMDSNSERKCDDSTPSKEELDTSCISMKETVLKRERIKEYSFNHRRSAESERSKVNGRWRYWLEQWVDTQLSKSKELEDLDSVFSSHAGGGEEYGSRQLKVRSINRQNPVEGLDSPTLGSRRSFPHRRQCSVGEDQSFSSSPATPAYMAATESARAKARSTSSPKIRTGGNVDMNSDSYSPCKKKLSIASSINSEVLSGCRMAKLSGNQQRSPSFKGLSVPVKSSRTIKDLSINSDCSLPNLALHGSFK* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0146 468 ProSiteProfiles IQ motif profile. 156 183 IPR000048 GO:0005515
Pvu11g0146 468 MobiDBLite consensus disorder prediction 349 366 - -
Pvu11g0146 468 Pfam Protein of unknown function (DUF4005) 353 431 IPR025064 -
Pvu11g0146 468 ProSiteProfiles IQ motif profile. 132 160 IPR000048 GO:0005515
Pvu11g0146 468 SMART iq_5 131 153 IPR000048 GO:0005515
Pvu11g0146 468 Gene3D - 129 183 - -
Pvu11g0146 468 PANTHER IQ-DOMAIN 11 5 454 - -
Pvu11g0146 468 Pfam IQ calmodulin-binding motif 134 153 IPR000048 GO:0005515
Pvu11g0146 468 MobiDBLite consensus disorder prediction 319 333 - -
Pvu11g0146 468 MobiDBLite consensus disorder prediction 374 393 - -
Pvu11g0146 468 MobiDBLite consensus disorder prediction 305 393 - -
Pvu11g0146 468 PANTHER IQ-DOMAIN 5-RELATED 5 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0146 Pvu-Chr11 1104945 1108864 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0146 1 468 IQD Protein Family AT5G13460 45.603 9.87e-110 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0146 - - gmx:100800192 721.079