Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0144 ATGGAGAAGTACCTCAGAGAAAACTTCAGCGTCCAGCCGAAGAACCCTTCCGAGTCCGCGCTCCGCCGATGGAGATCCGCCGTCGCCGTCGTCAAAAATCCCCGCCGCCGCTTCCGCATGGTCGCCAATCTCGCCCAGCGCGCGGAAGCCGAACACAAGCGTAGGAAGCTCCAGGAAAAAATAAGGGTGGCTCTCTATGTGCAAAAAGCAGCGTTGCATTTTATTAACGCTGGGAGCCGCGGTACTGGTGACGGCGGAGGTAAAGGTGGCGGCGGAGGTGACGGTGTCGCCGGCAGCGACAGCGGTGGTAGTCTCGGTTACATGCTCTCAAAAGAGACTCAGGAAGCAGGCTTCGAAATCGAGCCCGACGAACTAGCCTCCATTGTTCGGTCCCATGACAAGAAATGTTTAGAACGCTACGAAGGATTGGAAGGAGTAGCAAGGGCTGTTCGTGTGTCCTTGCAAGAGGGCGTTATCTCAGTCGATGTGGAGCACAGACAAAACATCTATGGTTTCAACCGCCACACCGAGAAGCCCCCCAGAAGCTTCTGGATGTTCGTTTGGGATGCCATGCAGGACTTAACTCTGATCATCCTCATGGCATGCTCTCTGGTTTCAGTAGGTGTTGGAATTTTAACCGAAGGTTGGCCGAAAGGTATGTACGATGGAGTGGGAATCATACTATCTATTCTCTTAGTGGTGTTTGTCACTTCGATCAGTGACTATAGACAGTCTTTGCAATTCAAGGACTTGGATAAAGAAAAGAAAAATGTGAGCATTCAAGTTACAAGAGACGGTAGAAGGCAAAAAGTTTTGATTCATGATATAGTGATAGGAGACATAGTCCATCTTTCAATAGGAGACATAGTTCCTGCAGATGGGTTGTTGATATCTGGTTTCGGCTTATTAATAGACGAATCAACTCTATCAGGTGAGAGCGACGCTGTAAATATTGATGATCGGAGGCCTTTTCTTCTATCTGGGACCACAGTGCAAGATGGGTCTGCTAAGATGTTGGTCACTTCCGTTGGTGTGAGGACGGAATGGGGGAGATTGATGGATACTCTGAACGAAGGAGGAGATGATGAGACGCCACTTCAGGTCAAACTAAATGGAGTTGCAACCATTATTGGGAAGATAGGCTTGGGTTTTGCCCTGGTAACATTCATGGTTCTGACGGGCAGGTTTTTGTGGGGGAAAATAGCTCACGATGAGATCACAAAATGGTCTTTGAATGATGCATCAAACCTTCTGAATTTCTTTGCCACGGCTGTGATTATCATAGTTGTGGCAGTTCCCGAGGGGCTTCCTCTGGCAGTCACACTGAGCCTTGCATTTGCAATGAAGAAATTGATGAATGACAGGGCACTGGTGAGGCATCTCTCTGCATGCGAGACCATGGGTTCAGCAGGCTGCATTTGCACTGATAAAACTGGGACTTTGACTACAAATCACATGGTTGTAGACAAGATATGGATTTGCGGACAAACTAAGGCCATTAAAAGTGAAAATGTGTTGAAGCCCTTGATTTCTGAACAAACGTTTGATCTTCTTTTGCAATCGATATTCCAGAACACTGGCTCAGAGATAGTCAAAGGGGTGGATGGAAAGAACAAGATCATGGGTACTCCCACAGAATCCGCACTGTTGGAATTTGGCTTGCTTTTGGGAGGTGATTCCAAGTTTTACAACAACAAGTATAAAATAGTGAAGGTTGAGCCTTTCAATTCGATCAGAAAAAAGATGTCAGTGATGGTGGCTCTTCCCGGTGGCACCACCTACAAGTATCGAGCATTTTGCAAAGGAGCATCAGAATTGATTGTGGAAATGTGCGACCGAGTTGTCAACGAAGAGGGCAGAGTGGTCTCTTTGAACGAACAGCAAAAGAGTAGCATCACAGAAGTTATCAACGGTTTTGCTTCTGAGGCTCTGAGAACACTCTGCATTGCCTTCAAGGATATTGAAGAATCTTCCAAGAGTGATGGTATTCCTGAGGACAAATACACTTTGATAGCTATTGTTGGGATCAAGGATCCAGTGAGGCCTGGAGTGAAAGAAGCTGTGAAGACTTGTTTAGAAGCTGGCATTGTGGTTAGAATGGTGACTGGTGACAACATAAACACTGCTAAAGCAATAGCTAGAGAATGCGGCATATTGACTGATGGCATCGCGATAGAGGGACCTGATTTCCGGAACAAGTCCCCGCAAGAATTGGAAAAGATAATACCAAAAATACAGGTTATGGCCCGATCCTTGCCCCTTGACAAGCACAAACTAGTGACCCTTTTGAGGGAGGATTTTAATGAGGTTGTGGCAGTAACTGGGGATGGAACCAATGATGCCCCAGCGTTGCATGAGGCTGATATTGGACTTGCTATGGGCATTGCAGGGACAGAGGTTGCAAAAGAGAACGCGGATGTGATTGTAATGGATGATAACTTCTCAACCATAGTGAAGGTTACCAGATGGGGCCGTGCTGTTTATATCAATATACAAAAGTTTGTTCAGTTCCAGTTAACAGTTAATGTTGTAGCTCTCATGCTGAATTTCGTTTCAGCCTGCGTGTCAGGCTCTGCTCCTCTTAGTGCTGTTCAAATGCTTTGGGTAAACATGATCATGGACACTCTCGGCGCGTTGGCTCTGGCTACAGAACCTCCCCATGATGGGCTTATGAAGAGGCCACCCATTGGAAAGAACGCCAAATTCATCACCAGGATCATGTGGAGGAACATAATTGGTCAGAGCATCTATCAAATTATCGTCCTTTTGGTTCTCAAATTTCGTGGTGAACAGATCCTCAAGCTCAATGGACCTGATACTACCGTACTTCTGAATACCGTCATATTCAACACCTTTGTATTTTGTCAGGTGTTCAACGAGATAAACAGCCGTGACATGGAGAAGATCAATGTGTTTGAAGGCATGTTAAGCAGCTGGGTTTTCTTGATAGTGATGGGTGTAACGATATGCTCTCAAGTCTTGATAGTTCAATATCTGGGTGCTTTTGCCCAAACGGTACCTCTGAGCCGGGAACTATGGCTAGCAAGCGTGATGATTGGTGCTGCAAGTTTAGTTGTTTCTGTTGTCCTAAAGTGCATTCCAGTTCCATCCAGCACCTACGTCGCCACCCACCATGATGGCTACGAGGAGCTCCCCAGTGGCCCTGATCAGGCATGA 3177 0.4662 MEKYLRENFSVQPKNPSESALRRWRSAVAVVKNPRRRFRMVANLAQRAEAEHKRRKLQEKIRVALYVQKAALHFINAGSRGTGDGGGKGGGGGDGVAGSDSGGSLGYMLSKETQEAGFEIEPDELASIVRSHDKKCLERYEGLEGVARAVRVSLQEGVISVDVEHRQNIYGFNRHTEKPPRSFWMFVWDAMQDLTLIILMACSLVSVGVGILTEGWPKGMYDGVGIILSILLVVFVTSISDYRQSLQFKDLDKEKKNVSIQVTRDGRRQKVLIHDIVIGDIVHLSIGDIVPADGLLISGFGLLIDESTLSGESDAVNIDDRRPFLLSGTTVQDGSAKMLVTSVGVRTEWGRLMDTLNEGGDDETPLQVKLNGVATIIGKIGLGFALVTFMVLTGRFLWGKIAHDEITKWSLNDASNLLNFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMNDRALVRHLSACETMGSAGCICTDKTGTLTTNHMVVDKIWICGQTKAIKSENVLKPLISEQTFDLLLQSIFQNTGSEIVKGVDGKNKIMGTPTESALLEFGLLLGGDSKFYNNKYKIVKVEPFNSIRKKMSVMVALPGGTTYKYRAFCKGASELIVEMCDRVVNEEGRVVSLNEQQKSSITEVINGFASEALRTLCIAFKDIEESSKSDGIPEDKYTLIAIVGIKDPVRPGVKEAVKTCLEAGIVVRMVTGDNINTAKAIARECGILTDGIAIEGPDFRNKSPQELEKIIPKIQVMARSLPLDKHKLVTLLREDFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIVMDDNFSTIVKVTRWGRAVYINIQKFVQFQLTVNVVALMLNFVSACVSGSAPLSAVQMLWVNMIMDTLGALALATEPPHDGLMKRPPIGKNAKFITRIMWRNIIGQSIYQIIVLLVLKFRGEQILKLNGPDTTVLLNTVIFNTFVFCQVFNEINSRDMEKINVFEGMLSSWVFLIVMGVTICSQVLIVQYLGAFAQTVPLSRELWLASVMIGAASLVVSVVLKCIPVPSSTYVATHHDGYEELPSGPDQA* 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0144 1058 Gene3D - 157 357 - -
Pvu11g0144 1058 SUPERFAMILY Calcium ATPase, transmembrane domain M 141 1034 IPR023298 -
Pvu11g0144 1058 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 481 676 IPR023299 GO:0000166
Pvu11g0144 1058 SFLD p-type atpase 456 826 IPR044492 -
Pvu11g0144 1058 Gene3D - 16 76 - -
Pvu11g0144 1058 Coils Coil 40 60 - -
Pvu11g0144 1058 Pfam Cation transporter/ATPase, N-terminus 141 206 IPR004014 -
Pvu11g0144 1058 Pfam E1-E2 ATPase 259 452 - -
Pvu11g0144 1058 SMART Cation_ATPase_N_a_2 139 211 IPR004014 -
Pvu11g0144 1058 Gene3D - 189 1033 - -
Pvu11g0144 1058 Gene3D - 471 819 IPR023214 -
Pvu11g0144 1058 PRINTS P-type cation-transporting ATPase superfamily signature 305 319 - -
Pvu11g0144 1058 PRINTS P-type cation-transporting ATPase superfamily signature 474 488 - -
Pvu11g0144 1058 PRINTS P-type cation-transporting ATPase superfamily signature 672 683 - -
Pvu11g0144 1058 PRINTS P-type cation-transporting ATPase superfamily signature 694 704 - -
Pvu11g0144 1058 PRINTS P-type cation-transporting ATPase superfamily signature 774 793 - -
Pvu11g0144 1058 PRINTS P-type cation-transporting ATPase superfamily signature 798 810 - -
Pvu11g0144 1058 SUPERFAMILY Calcium ATPase, transduction domain A 259 355 IPR008250 -
Pvu11g0144 1058 PANTHER CALCIUM-TRANSPORTING ATPASE 3 1042 - -
Pvu11g0144 1058 Pfam Cation transporting ATPase, C-terminus 859 1032 IPR006068 -
Pvu11g0144 1058 SFLD C1.7: P-type atpase like 456 826 - -
Pvu11g0144 1058 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 568 720 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu11g0144 1058 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 226 498 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu11g0144 1058 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 740 857 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu11g0144 1058 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Pvu11g0144 1058 PRINTS H+-transporting ATPase (proton pump) signature 632 650 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu11g0144 1058 PRINTS H+-transporting ATPase (proton pump) signature 774 790 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu11g0144 1058 PRINTS H+-transporting ATPase (proton pump) signature 806 831 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu11g0144 1058 ProSitePatterns E1-E2 ATPases phosphorylation site. 476 482 IPR018303 -
Pvu11g0144 1058 Pfam haloacid dehalogenase-like hydrolase 472 788 - -
Pvu11g0144 1058 Gene3D - 484 679 IPR023299 GO:0000166
Pvu11g0144 1058 SUPERFAMILY HAD-like 473 879 IPR036412 -
Pvu11g0144 1058 PANTHER CATION TRANSPORTING ATPASE 3 1042 - -
Pvu11g0144 1058 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 132 1035 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pvu11g0144 1058 CDD P-type_ATPase_Ca_PMCA-like 163 907 - -
Pvu11g0144 1058 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0144 Pvu-Chr11 1077807 1085390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0144 57 1058 Primary Pumps ATPases AT3G57330 66.899 0.0 1374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0144 K01537 - gmx:100801260 1777.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0144 11 1077807 1085390 Pvu11g0144 11 1077807 1085390 ECH